Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8222 | 24889;24890;24891 | chr2:178718442;178718441;178718440 | chr2:179583169;179583168;179583167 |
N2AB | 7905 | 23938;23939;23940 | chr2:178718442;178718441;178718440 | chr2:179583169;179583168;179583167 |
N2A | 6978 | 21157;21158;21159 | chr2:178718442;178718441;178718440 | chr2:179583169;179583168;179583167 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.994 | D | 0.322 | 0.357 | 0.482283251092 | gnomAD-4.0.0 | 6.84228E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99496E-07 | 0 | 0 |
T/R | None | None | 0.994 | D | 0.324 | 0.336 | 0.532842626647 | gnomAD-4.0.0 | 6.84228E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99496E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2934 | likely_benign | 0.2712 | benign | -0.518 | Destabilizing | 0.116 | N | 0.125 | neutral | N | 0.493632502 | None | None | N |
T/C | 0.9202 | likely_pathogenic | 0.8924 | pathogenic | -0.305 | Destabilizing | 1.0 | D | 0.332 | neutral | None | None | None | None | N |
T/D | 0.6483 | likely_pathogenic | 0.6026 | pathogenic | 0.221 | Stabilizing | 0.969 | D | 0.326 | neutral | None | None | None | None | N |
T/E | 0.654 | likely_pathogenic | 0.6429 | pathogenic | 0.173 | Stabilizing | 0.969 | D | 0.287 | neutral | None | None | None | None | N |
T/F | 0.7975 | likely_pathogenic | 0.7878 | pathogenic | -0.871 | Destabilizing | 0.999 | D | 0.415 | neutral | None | None | None | None | N |
T/G | 0.4429 | ambiguous | 0.4032 | ambiguous | -0.697 | Destabilizing | 0.969 | D | 0.335 | neutral | None | None | None | None | N |
T/H | 0.7104 | likely_pathogenic | 0.651 | pathogenic | -0.949 | Destabilizing | 1.0 | D | 0.414 | neutral | None | None | None | None | N |
T/I | 0.7969 | likely_pathogenic | 0.8102 | pathogenic | -0.159 | Destabilizing | 0.994 | D | 0.322 | neutral | D | 0.527480366 | None | None | N |
T/K | 0.5669 | likely_pathogenic | 0.5219 | ambiguous | -0.457 | Destabilizing | 0.959 | D | 0.309 | neutral | N | 0.482134384 | None | None | N |
T/L | 0.3496 | ambiguous | 0.3415 | ambiguous | -0.159 | Destabilizing | 0.969 | D | 0.305 | neutral | None | None | None | None | N |
T/M | 0.2077 | likely_benign | 0.1991 | benign | -0.017 | Destabilizing | 1.0 | D | 0.327 | neutral | None | None | None | None | N |
T/N | 0.2628 | likely_benign | 0.2283 | benign | -0.29 | Destabilizing | 0.969 | D | 0.266 | neutral | None | None | None | None | N |
T/P | 0.646 | likely_pathogenic | 0.6328 | pathogenic | -0.248 | Destabilizing | 0.068 | N | 0.233 | neutral | N | 0.488316584 | None | None | N |
T/Q | 0.5656 | likely_pathogenic | 0.5224 | ambiguous | -0.463 | Destabilizing | 0.995 | D | 0.333 | neutral | None | None | None | None | N |
T/R | 0.5133 | ambiguous | 0.4782 | ambiguous | -0.197 | Destabilizing | 0.994 | D | 0.324 | neutral | D | 0.535059699 | None | None | N |
T/S | 0.27 | likely_benign | 0.2103 | benign | -0.535 | Destabilizing | 0.476 | N | 0.199 | neutral | D | 0.532750113 | None | None | N |
T/V | 0.628 | likely_pathogenic | 0.6379 | pathogenic | -0.248 | Destabilizing | 0.969 | D | 0.225 | neutral | None | None | None | None | N |
T/W | 0.9308 | likely_pathogenic | 0.915 | pathogenic | -0.862 | Destabilizing | 1.0 | D | 0.522 | neutral | None | None | None | None | N |
T/Y | 0.8165 | likely_pathogenic | 0.7918 | pathogenic | -0.597 | Destabilizing | 0.999 | D | 0.411 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.