Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8232 | 24919;24920;24921 | chr2:178718412;178718411;178718410 | chr2:179583139;179583138;179583137 |
N2AB | 7915 | 23968;23969;23970 | chr2:178718412;178718411;178718410 | chr2:179583139;179583138;179583137 |
N2A | 6988 | 21187;21188;21189 | chr2:178718412;178718411;178718410 | chr2:179583139;179583138;179583137 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | None | None | 0.027 | N | 0.375 | 0.085 | 0.165133752707 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 6.17284E-04 | 3.9375E-06 | 0 | 0 |
E/Q | None | None | None | N | 0.272 | 0.072 | 0.101711395817 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1284 | likely_benign | 0.1183 | benign | -0.561 | Destabilizing | 0.027 | N | 0.337 | neutral | N | 0.472004646 | None | None | N |
E/C | 0.6829 | likely_pathogenic | 0.6757 | pathogenic | -0.024 | Destabilizing | 0.935 | D | 0.433 | neutral | None | None | None | None | N |
E/D | 0.0901 | likely_benign | 0.0704 | benign | -0.372 | Destabilizing | None | N | 0.121 | neutral | N | 0.448740997 | None | None | N |
E/F | 0.5833 | likely_pathogenic | 0.5603 | ambiguous | -0.414 | Destabilizing | 0.791 | D | 0.429 | neutral | None | None | None | None | N |
E/G | 0.122 | likely_benign | 0.109 | benign | -0.786 | Destabilizing | 0.027 | N | 0.375 | neutral | N | 0.479295977 | None | None | N |
E/H | 0.2473 | likely_benign | 0.2344 | benign | -0.419 | Destabilizing | 0.38 | N | 0.362 | neutral | None | None | None | None | N |
E/I | 0.3435 | ambiguous | 0.3356 | benign | 0.006 | Stabilizing | 0.555 | D | 0.444 | neutral | None | None | None | None | N |
E/K | 0.1148 | likely_benign | 0.1147 | benign | 0.234 | Stabilizing | 0.027 | N | 0.303 | neutral | N | 0.475562239 | None | None | N |
E/L | 0.3471 | ambiguous | 0.3201 | benign | 0.006 | Stabilizing | 0.149 | N | 0.429 | neutral | None | None | None | None | N |
E/M | 0.4331 | ambiguous | 0.4175 | ambiguous | 0.277 | Stabilizing | 0.824 | D | 0.391 | neutral | None | None | None | None | N |
E/N | 0.1328 | likely_benign | 0.1079 | benign | -0.119 | Destabilizing | None | N | 0.099 | neutral | None | None | None | None | N |
E/P | 0.5129 | ambiguous | 0.5045 | ambiguous | -0.163 | Destabilizing | 0.555 | D | 0.39 | neutral | None | None | None | None | N |
E/Q | 0.103 | likely_benign | 0.1021 | benign | -0.062 | Destabilizing | None | N | 0.272 | neutral | N | 0.466252109 | None | None | N |
E/R | 0.1691 | likely_benign | 0.1741 | benign | 0.344 | Stabilizing | 0.081 | N | 0.321 | neutral | None | None | None | None | N |
E/S | 0.1203 | likely_benign | 0.1087 | benign | -0.293 | Destabilizing | 0.002 | N | 0.169 | neutral | None | None | None | None | N |
E/T | 0.1641 | likely_benign | 0.1513 | benign | -0.103 | Destabilizing | 0.081 | N | 0.343 | neutral | None | None | None | None | N |
E/V | 0.2153 | likely_benign | 0.2069 | benign | -0.163 | Destabilizing | 0.117 | N | 0.388 | neutral | N | 0.455629662 | None | None | N |
E/W | 0.7584 | likely_pathogenic | 0.749 | pathogenic | -0.234 | Destabilizing | 0.935 | D | 0.539 | neutral | None | None | None | None | N |
E/Y | 0.3992 | ambiguous | 0.3719 | ambiguous | -0.17 | Destabilizing | 0.555 | D | 0.415 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.