Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8236 | 24931;24932;24933 | chr2:178718400;178718399;178718398 | chr2:179583127;179583126;179583125 |
N2AB | 7919 | 23980;23981;23982 | chr2:178718400;178718399;178718398 | chr2:179583127;179583126;179583125 |
N2A | 6992 | 21199;21200;21201 | chr2:178718400;178718399;178718398 | chr2:179583127;179583126;179583125 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs377762626 | 0.7 | 0.505 | N | 0.46 | 0.214 | None | gnomAD-2.1.1 | 2.41E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.54E-05 | None | 0 | 3.56E-05 | 0 |
E/K | rs377762626 | 0.7 | 0.505 | N | 0.46 | 0.214 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06782E-04 | 0 |
E/K | rs377762626 | 0.7 | 0.505 | N | 0.46 | 0.214 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
E/K | rs377762626 | 0.7 | 0.505 | N | 0.46 | 0.214 | None | gnomAD-4.0.0 | 1.09475E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.07938E-05 | 4.63736E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1424 | likely_benign | 0.1304 | benign | -0.168 | Destabilizing | 0.174 | N | 0.457 | neutral | N | 0.499943395 | None | None | N |
E/C | 0.8411 | likely_pathogenic | 0.8251 | pathogenic | 0.08 | Stabilizing | 0.991 | D | 0.553 | neutral | None | None | None | None | N |
E/D | 0.0932 | likely_benign | 0.0873 | benign | -0.183 | Destabilizing | 0.001 | N | 0.158 | neutral | N | 0.478778689 | None | None | N |
E/F | 0.7089 | likely_pathogenic | 0.6968 | pathogenic | -0.212 | Destabilizing | 0.967 | D | 0.521 | neutral | None | None | None | None | N |
E/G | 0.1338 | likely_benign | 0.121 | benign | -0.31 | Destabilizing | 0.338 | N | 0.444 | neutral | N | 0.456265226 | None | None | N |
E/H | 0.3835 | ambiguous | 0.3603 | ambiguous | 0.159 | Stabilizing | 0.967 | D | 0.401 | neutral | None | None | None | None | N |
E/I | 0.4385 | ambiguous | 0.4204 | ambiguous | 0.151 | Stabilizing | 0.906 | D | 0.515 | neutral | None | None | None | None | N |
E/K | 0.1177 | likely_benign | 0.1084 | benign | 0.496 | Stabilizing | 0.505 | D | 0.46 | neutral | N | 0.457581899 | None | None | N |
E/L | 0.4104 | ambiguous | 0.3823 | ambiguous | 0.151 | Stabilizing | 0.826 | D | 0.423 | neutral | None | None | None | None | N |
E/M | 0.4786 | ambiguous | 0.4531 | ambiguous | 0.176 | Stabilizing | 0.991 | D | 0.496 | neutral | None | None | None | None | N |
E/N | 0.206 | likely_benign | 0.1869 | benign | 0.284 | Stabilizing | 0.404 | N | 0.405 | neutral | None | None | None | None | N |
E/P | 0.6104 | likely_pathogenic | 0.5668 | pathogenic | 0.064 | Stabilizing | 0.906 | D | 0.401 | neutral | None | None | None | None | N |
E/Q | 0.1396 | likely_benign | 0.1297 | benign | 0.302 | Stabilizing | 0.505 | D | 0.431 | neutral | N | 0.466976422 | None | None | N |
E/R | 0.2003 | likely_benign | 0.1971 | benign | 0.634 | Stabilizing | 0.826 | D | 0.393 | neutral | None | None | None | None | N |
E/S | 0.157 | likely_benign | 0.1477 | benign | 0.131 | Stabilizing | 0.018 | N | 0.209 | neutral | None | None | None | None | N |
E/T | 0.1958 | likely_benign | 0.1803 | benign | 0.251 | Stabilizing | 0.404 | N | 0.419 | neutral | None | None | None | None | N |
E/V | 0.2784 | likely_benign | 0.2561 | benign | 0.064 | Stabilizing | 0.782 | D | 0.407 | neutral | N | 0.488816886 | None | None | N |
E/W | 0.8197 | likely_pathogenic | 0.8012 | pathogenic | -0.14 | Destabilizing | 0.991 | D | 0.655 | neutral | None | None | None | None | N |
E/Y | 0.5698 | likely_pathogenic | 0.5408 | ambiguous | 0.017 | Stabilizing | 0.967 | D | 0.499 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.