Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8240 | 24943;24944;24945 | chr2:178718388;178718387;178718386 | chr2:179583115;179583114;179583113 |
N2AB | 7923 | 23992;23993;23994 | chr2:178718388;178718387;178718386 | chr2:179583115;179583114;179583113 |
N2A | 6996 | 21211;21212;21213 | chr2:178718388;178718387;178718386 | chr2:179583115;179583114;179583113 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs1350676942 | None | 0.882 | N | 0.419 | 0.322 | 0.185906805712 | gnomAD-4.0.0 | 6.84224E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.73551E-04 | 0 | 0 | 0 |
Q/R | rs747625896 | -0.211 | None | N | 0.107 | 0.183 | 0.187945064343 | gnomAD-2.1.1 | 2.01E-05 | None | None | None | None | I | None | 0 | 1.44877E-04 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
Q/R | rs747625896 | -0.211 | None | N | 0.107 | 0.183 | 0.187945064343 | gnomAD-4.0.0 | 1.27308E-05 | None | None | None | None | I | None | 0 | 1.82907E-04 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1802 | likely_benign | 0.187 | benign | -0.8 | Destabilizing | 0.098 | N | 0.297 | neutral | None | None | None | None | I |
Q/C | 0.5867 | likely_pathogenic | 0.6452 | pathogenic | -0.122 | Destabilizing | 0.968 | D | 0.506 | neutral | None | None | None | None | I |
Q/D | 0.2931 | likely_benign | 0.3122 | benign | -0.635 | Destabilizing | 0.223 | N | 0.351 | neutral | None | None | None | None | I |
Q/E | 0.0764 | likely_benign | 0.0737 | benign | -0.522 | Destabilizing | None | N | 0.122 | neutral | N | 0.444976413 | None | None | I |
Q/F | 0.5258 | ambiguous | 0.567 | pathogenic | -0.493 | Destabilizing | 0.582 | D | 0.582 | neutral | None | None | None | None | I |
Q/G | 0.2384 | likely_benign | 0.2465 | benign | -1.166 | Destabilizing | 0.365 | N | 0.361 | neutral | None | None | None | None | I |
Q/H | 0.1493 | likely_benign | 0.1606 | benign | -0.973 | Destabilizing | 0.882 | D | 0.419 | neutral | N | 0.484010943 | None | None | I |
Q/I | 0.2697 | likely_benign | 0.3031 | benign | 0.142 | Stabilizing | 0.223 | N | 0.4 | neutral | None | None | None | None | I |
Q/K | 0.0663 | likely_benign | 0.0698 | benign | -0.323 | Destabilizing | 0.006 | N | 0.132 | neutral | N | 0.440877315 | None | None | I |
Q/L | 0.1184 | likely_benign | 0.1298 | benign | 0.142 | Stabilizing | 0.001 | N | 0.27 | neutral | N | 0.49734946 | None | None | I |
Q/M | 0.3024 | likely_benign | 0.3277 | benign | 0.608 | Stabilizing | 0.83 | D | 0.431 | neutral | None | None | None | None | I |
Q/N | 0.2003 | likely_benign | 0.2212 | benign | -0.918 | Destabilizing | 0.365 | N | 0.377 | neutral | None | None | None | None | I |
Q/P | 0.1417 | likely_benign | 0.1493 | benign | -0.141 | Destabilizing | 0.68 | D | 0.463 | neutral | N | 0.48265459 | None | None | I |
Q/R | 0.0754 | likely_benign | 0.0825 | benign | -0.272 | Destabilizing | None | N | 0.107 | neutral | N | 0.476184754 | None | None | I |
Q/S | 0.1887 | likely_benign | 0.2031 | benign | -1.063 | Destabilizing | 0.111 | N | 0.3 | neutral | None | None | None | None | I |
Q/T | 0.1443 | likely_benign | 0.1563 | benign | -0.747 | Destabilizing | 0.008 | N | 0.188 | neutral | None | None | None | None | I |
Q/V | 0.1866 | likely_benign | 0.1995 | benign | -0.141 | Destabilizing | 0.008 | N | 0.287 | neutral | None | None | None | None | I |
Q/W | 0.4043 | ambiguous | 0.4308 | ambiguous | -0.338 | Destabilizing | 0.991 | D | 0.505 | neutral | None | None | None | None | I |
Q/Y | 0.3345 | likely_benign | 0.3688 | ambiguous | -0.108 | Destabilizing | 0.896 | D | 0.498 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.