Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8245 | 24958;24959;24960 | chr2:178718373;178718372;178718371 | chr2:179583100;179583099;179583098 |
N2AB | 7928 | 24007;24008;24009 | chr2:178718373;178718372;178718371 | chr2:179583100;179583099;179583098 |
N2A | 7001 | 21226;21227;21228 | chr2:178718373;178718372;178718371 | chr2:179583100;179583099;179583098 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.927 | N | 0.661 | 0.39 | 0.484109215787 | gnomAD-4.0.0 | 1.5914E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.773E-05 | None | 0 | 0 | 0 | 0 | 0 |
I/T | rs1309374626 | -2.695 | 0.425 | N | 0.657 | 0.368 | 0.605748623547 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
I/T | rs1309374626 | -2.695 | 0.425 | N | 0.657 | 0.368 | 0.605748623547 | gnomAD-4.0.0 | 1.59141E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8586E-06 | 0 | 0 |
I/V | None | None | 0.002 | N | 0.257 | 0.113 | 0.301789629655 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5287 | ambiguous | 0.5278 | ambiguous | -3.02 | Highly Destabilizing | 0.013 | N | 0.451 | neutral | None | None | None | None | N |
I/C | 0.9539 | likely_pathogenic | 0.9462 | pathogenic | -2.294 | Highly Destabilizing | 0.981 | D | 0.771 | deleterious | None | None | None | None | N |
I/D | 0.9986 | likely_pathogenic | 0.9981 | pathogenic | -3.573 | Highly Destabilizing | 0.704 | D | 0.776 | deleterious | None | None | None | None | N |
I/E | 0.9929 | likely_pathogenic | 0.9917 | pathogenic | -3.292 | Highly Destabilizing | 0.543 | D | 0.751 | deleterious | None | None | None | None | N |
I/F | 0.8462 | likely_pathogenic | 0.8043 | pathogenic | -1.612 | Destabilizing | 0.704 | D | 0.685 | prob.neutral | None | None | None | None | N |
I/G | 0.9723 | likely_pathogenic | 0.966 | pathogenic | -3.563 | Highly Destabilizing | 0.704 | D | 0.73 | prob.delet. | None | None | None | None | N |
I/H | 0.9965 | likely_pathogenic | 0.9954 | pathogenic | -3.011 | Highly Destabilizing | 0.944 | D | 0.825 | deleterious | None | None | None | None | N |
I/K | 0.9901 | likely_pathogenic | 0.988 | pathogenic | -2.196 | Highly Destabilizing | 0.473 | N | 0.755 | deleterious | N | 0.513079883 | None | None | N |
I/L | 0.2611 | likely_benign | 0.234 | benign | -1.388 | Destabilizing | 0.139 | N | 0.403 | neutral | N | 0.495733307 | None | None | N |
I/M | 0.293 | likely_benign | 0.2797 | benign | -1.655 | Destabilizing | 0.927 | D | 0.661 | neutral | N | 0.501558993 | None | None | N |
I/N | 0.9818 | likely_pathogenic | 0.9784 | pathogenic | -2.763 | Highly Destabilizing | 0.944 | D | 0.807 | deleterious | None | None | None | None | N |
I/P | 0.9918 | likely_pathogenic | 0.9897 | pathogenic | -1.924 | Destabilizing | 0.944 | D | 0.806 | deleterious | None | None | None | None | N |
I/Q | 0.9878 | likely_pathogenic | 0.9851 | pathogenic | -2.494 | Highly Destabilizing | 0.085 | N | 0.6 | neutral | None | None | None | None | N |
I/R | 0.9798 | likely_pathogenic | 0.9766 | pathogenic | -2.057 | Highly Destabilizing | 0.863 | D | 0.804 | deleterious | N | 0.513333372 | None | None | N |
I/S | 0.8893 | likely_pathogenic | 0.8865 | pathogenic | -3.328 | Highly Destabilizing | 0.543 | D | 0.714 | prob.delet. | None | None | None | None | N |
I/T | 0.5385 | ambiguous | 0.5292 | ambiguous | -2.91 | Highly Destabilizing | 0.425 | N | 0.657 | neutral | N | 0.501052014 | None | None | N |
I/V | 0.0899 | likely_benign | 0.0839 | benign | -1.924 | Destabilizing | 0.002 | N | 0.257 | neutral | N | 0.422230052 | None | None | N |
I/W | 0.9972 | likely_pathogenic | 0.9957 | pathogenic | -1.998 | Destabilizing | 0.017 | N | 0.602 | neutral | None | None | None | None | N |
I/Y | 0.991 | likely_pathogenic | 0.9884 | pathogenic | -1.883 | Destabilizing | 0.893 | D | 0.753 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.