Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8246 | 24961;24962;24963 | chr2:178718370;178718369;178718368 | chr2:179583097;179583096;179583095 |
N2AB | 7929 | 24010;24011;24012 | chr2:178718370;178718369;178718368 | chr2:179583097;179583096;179583095 |
N2A | 7002 | 21229;21230;21231 | chr2:178718370;178718369;178718368 | chr2:179583097;179583096;179583095 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs578260569 | -0.008 | 0.27 | N | 0.283 | 0.186 | None | gnomAD-2.1.1 | 3.22E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 2.61558E-04 | None | 0 | 0 | 0 |
E/K | rs578260569 | -0.008 | 0.27 | N | 0.283 | 0.186 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06954E-04 | 0 |
E/K | rs578260569 | -0.008 | 0.27 | N | 0.283 | 0.186 | None | 1000 genomes | 1.99681E-04 | None | None | None | None | I | None | 0 | 0 | None | None | 0 | 0 | None | None | None | 1E-03 | None |
E/K | rs578260569 | -0.008 | 0.27 | N | 0.283 | 0.186 | None | gnomAD-4.0.0 | 1.67307E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.47649E-07 | 2.85488E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1688 | likely_benign | 0.1628 | benign | -0.861 | Destabilizing | 0.002 | N | 0.187 | neutral | N | 0.512606914 | None | None | I |
E/C | 0.8441 | likely_pathogenic | 0.8239 | pathogenic | -0.337 | Destabilizing | 0.985 | D | 0.526 | neutral | None | None | None | None | I |
E/D | 0.2563 | likely_benign | 0.2233 | benign | -1.062 | Destabilizing | 0.425 | N | 0.266 | neutral | D | 0.530539314 | None | None | I |
E/F | 0.7551 | likely_pathogenic | 0.7235 | pathogenic | -0.844 | Destabilizing | 0.007 | N | 0.452 | neutral | None | None | None | None | I |
E/G | 0.1771 | likely_benign | 0.1729 | benign | -1.161 | Destabilizing | 0.27 | N | 0.476 | neutral | N | 0.498863195 | None | None | I |
E/H | 0.3926 | ambiguous | 0.3633 | ambiguous | -1.099 | Destabilizing | 0.981 | D | 0.467 | neutral | None | None | None | None | I |
E/I | 0.417 | ambiguous | 0.4066 | ambiguous | -0.062 | Destabilizing | 0.704 | D | 0.561 | neutral | None | None | None | None | I |
E/K | 0.1026 | likely_benign | 0.1085 | benign | -0.279 | Destabilizing | 0.27 | N | 0.283 | neutral | N | 0.503139282 | None | None | I |
E/L | 0.4533 | ambiguous | 0.4374 | ambiguous | -0.062 | Destabilizing | 0.329 | N | 0.503 | neutral | None | None | None | None | I |
E/M | 0.4615 | ambiguous | 0.4451 | ambiguous | 0.412 | Stabilizing | 0.981 | D | 0.51 | neutral | None | None | None | None | I |
E/N | 0.3157 | likely_benign | 0.2884 | benign | -0.598 | Destabilizing | 0.704 | D | 0.297 | neutral | None | None | None | None | I |
E/P | 0.9777 | likely_pathogenic | 0.9711 | pathogenic | -0.308 | Destabilizing | 0.944 | D | 0.482 | neutral | None | None | None | None | I |
E/Q | 0.0954 | likely_benign | 0.0962 | benign | -0.555 | Destabilizing | 0.642 | D | 0.385 | neutral | D | 0.531635392 | None | None | I |
E/R | 0.176 | likely_benign | 0.1796 | benign | -0.238 | Destabilizing | 0.007 | N | 0.203 | neutral | None | None | None | None | I |
E/S | 0.1774 | likely_benign | 0.1691 | benign | -0.926 | Destabilizing | 0.013 | N | 0.108 | neutral | None | None | None | None | I |
E/T | 0.1911 | likely_benign | 0.1784 | benign | -0.666 | Destabilizing | 0.329 | N | 0.387 | neutral | None | None | None | None | I |
E/V | 0.2605 | likely_benign | 0.2528 | benign | -0.308 | Destabilizing | 0.473 | N | 0.508 | neutral | N | 0.514743142 | None | None | I |
E/W | 0.8856 | likely_pathogenic | 0.8527 | pathogenic | -0.712 | Destabilizing | 0.995 | D | 0.539 | neutral | None | None | None | None | I |
E/Y | 0.6444 | likely_pathogenic | 0.5987 | pathogenic | -0.578 | Destabilizing | 0.807 | D | 0.533 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.