Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8249 | 24970;24971;24972 | chr2:178718361;178718360;178718359 | chr2:179583088;179583087;179583086 |
N2AB | 7932 | 24019;24020;24021 | chr2:178718361;178718360;178718359 | chr2:179583088;179583087;179583086 |
N2A | 7005 | 21238;21239;21240 | chr2:178718361;178718360;178718359 | chr2:179583088;179583087;179583086 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/D | None | None | 0.994 | N | 0.634 | 0.442 | 0.562990493178 | gnomAD-4.0.0 | 1.59151E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.773E-05 | None | 0 | 0 | 0 | 0 | 0 |
A/S | None | None | 0.798 | D | 0.377 | 0.261 | 0.317667799068 | gnomAD-4.0.0 | 6.84258E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.87322E-05 | 0 | 0 | 0 | 0 |
A/T | None | None | 0.978 | D | 0.534 | 0.434 | 0.408714661073 | gnomAD-4.0.0 | 6.84258E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.15958E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.7993 | likely_pathogenic | 0.76 | pathogenic | -0.806 | Destabilizing | 1.0 | D | 0.597 | neutral | None | None | None | None | I |
A/D | 0.7446 | likely_pathogenic | 0.7287 | pathogenic | -0.566 | Destabilizing | 0.994 | D | 0.634 | neutral | N | 0.508777923 | None | None | I |
A/E | 0.6786 | likely_pathogenic | 0.6457 | pathogenic | -0.719 | Destabilizing | 0.995 | D | 0.532 | neutral | None | None | None | None | I |
A/F | 0.5118 | ambiguous | 0.5034 | ambiguous | -0.932 | Destabilizing | 0.99 | D | 0.64 | neutral | None | None | None | None | I |
A/G | 0.3309 | likely_benign | 0.3228 | benign | -0.191 | Destabilizing | 0.978 | D | 0.512 | neutral | N | 0.518270897 | None | None | I |
A/H | 0.8322 | likely_pathogenic | 0.8241 | pathogenic | -0.191 | Destabilizing | 0.999 | D | 0.646 | neutral | None | None | None | None | I |
A/I | 0.4757 | ambiguous | 0.3933 | ambiguous | -0.417 | Destabilizing | 0.998 | D | 0.575 | neutral | None | None | None | None | I |
A/K | 0.9122 | likely_pathogenic | 0.8897 | pathogenic | -0.467 | Destabilizing | 0.995 | D | 0.531 | neutral | None | None | None | None | I |
A/L | 0.4795 | ambiguous | 0.4526 | ambiguous | -0.417 | Destabilizing | 0.983 | D | 0.564 | neutral | None | None | None | None | I |
A/M | 0.5072 | ambiguous | 0.4598 | ambiguous | -0.526 | Destabilizing | 1.0 | D | 0.587 | neutral | None | None | None | None | I |
A/N | 0.6752 | likely_pathogenic | 0.6561 | pathogenic | -0.175 | Destabilizing | 0.995 | D | 0.641 | neutral | None | None | None | None | I |
A/P | 0.936 | likely_pathogenic | 0.9249 | pathogenic | -0.322 | Destabilizing | 0.999 | D | 0.569 | neutral | D | 0.531655118 | None | None | I |
A/Q | 0.7866 | likely_pathogenic | 0.7612 | pathogenic | -0.451 | Destabilizing | 0.998 | D | 0.573 | neutral | None | None | None | None | I |
A/R | 0.8346 | likely_pathogenic | 0.8182 | pathogenic | -0.037 | Destabilizing | 0.998 | D | 0.571 | neutral | None | None | None | None | I |
A/S | 0.169 | likely_benign | 0.1605 | benign | -0.347 | Destabilizing | 0.798 | D | 0.377 | neutral | D | 0.536561209 | None | None | I |
A/T | 0.2543 | likely_benign | 0.2156 | benign | -0.432 | Destabilizing | 0.978 | D | 0.534 | neutral | D | 0.528359754 | None | None | I |
A/V | 0.1983 | likely_benign | 0.1622 | benign | -0.322 | Destabilizing | 0.978 | D | 0.531 | neutral | D | 0.52413063 | None | None | I |
A/W | 0.9209 | likely_pathogenic | 0.9121 | pathogenic | -1.019 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | I |
A/Y | 0.7287 | likely_pathogenic | 0.7207 | pathogenic | -0.704 | Destabilizing | 0.643 | D | 0.518 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.