Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8251 | 24976;24977;24978 | chr2:178718355;178718354;178718353 | chr2:179583082;179583081;179583080 |
N2AB | 7934 | 24025;24026;24027 | chr2:178718355;178718354;178718353 | chr2:179583082;179583081;179583080 |
N2A | 7007 | 21244;21245;21246 | chr2:178718355;178718354;178718353 | chr2:179583082;179583081;179583080 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | rs1377167368 | -0.656 | 0.001 | N | 0.159 | 0.16 | 0.259761712551 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
Q/H | rs1377167368 | -0.656 | 0.001 | N | 0.159 | 0.16 | 0.259761712551 | gnomAD-4.0.0 | 3.42136E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.49772E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.2048 | likely_benign | 0.1728 | benign | -0.3 | Destabilizing | 0.016 | N | 0.287 | neutral | None | None | None | None | N |
Q/C | 0.6058 | likely_pathogenic | 0.5516 | ambiguous | 0.13 | Stabilizing | 0.901 | D | 0.517 | neutral | None | None | None | None | N |
Q/D | 0.3474 | ambiguous | 0.2986 | benign | 0.028 | Stabilizing | 0.036 | N | 0.212 | neutral | None | None | None | None | N |
Q/E | 0.0739 | likely_benign | 0.0678 | benign | 0.03 | Stabilizing | None | N | 0.124 | neutral | N | 0.438991803 | None | None | N |
Q/F | 0.6352 | likely_pathogenic | 0.5701 | pathogenic | -0.352 | Destabilizing | 0.174 | N | 0.565 | neutral | None | None | None | None | N |
Q/G | 0.2083 | likely_benign | 0.176 | benign | -0.535 | Destabilizing | None | N | 0.207 | neutral | None | None | None | None | N |
Q/H | 0.1943 | likely_benign | 0.1716 | benign | -0.354 | Destabilizing | 0.001 | N | 0.159 | neutral | N | 0.499640404 | None | None | N |
Q/I | 0.3959 | ambiguous | 0.3405 | ambiguous | 0.241 | Stabilizing | 0.296 | N | 0.575 | neutral | None | None | None | None | N |
Q/K | 0.064 | likely_benign | 0.0654 | benign | 0.016 | Stabilizing | 0.028 | N | 0.189 | neutral | N | 0.431372397 | None | None | N |
Q/L | 0.165 | likely_benign | 0.1422 | benign | 0.241 | Stabilizing | 0.116 | N | 0.441 | neutral | N | 0.490620762 | None | None | N |
Q/M | 0.3413 | ambiguous | 0.3062 | benign | 0.473 | Stabilizing | 0.901 | D | 0.368 | neutral | None | None | None | None | N |
Q/N | 0.2501 | likely_benign | 0.2227 | benign | -0.356 | Destabilizing | 0.148 | N | 0.269 | neutral | None | None | None | None | N |
Q/P | 0.3887 | ambiguous | 0.3615 | ambiguous | 0.09 | Stabilizing | 0.391 | N | 0.489 | neutral | D | 0.529269877 | None | None | N |
Q/R | 0.0739 | likely_benign | 0.0725 | benign | 0.178 | Stabilizing | None | N | 0.139 | neutral | N | 0.456580273 | None | None | N |
Q/S | 0.2073 | likely_benign | 0.1843 | benign | -0.39 | Destabilizing | 0.007 | N | 0.123 | neutral | None | None | None | None | N |
Q/T | 0.1724 | likely_benign | 0.1523 | benign | -0.217 | Destabilizing | 0.002 | N | 0.165 | neutral | None | None | None | None | N |
Q/V | 0.2608 | likely_benign | 0.2232 | benign | 0.09 | Stabilizing | 0.148 | N | 0.458 | neutral | None | None | None | None | N |
Q/W | 0.4695 | ambiguous | 0.4116 | ambiguous | -0.284 | Destabilizing | 0.901 | D | 0.505 | neutral | None | None | None | None | N |
Q/Y | 0.4094 | ambiguous | 0.3515 | ambiguous | -0.048 | Destabilizing | 0.002 | N | 0.187 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.