Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8252 | 24979;24980;24981 | chr2:178718352;178718351;178718350 | chr2:179583079;179583078;179583077 |
N2AB | 7935 | 24028;24029;24030 | chr2:178718352;178718351;178718350 | chr2:179583079;179583078;179583077 |
N2A | 7008 | 21247;21248;21249 | chr2:178718352;178718351;178718350 | chr2:179583079;179583078;179583077 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | rs762054067 | None | 0.543 | N | 0.483 | 0.333 | 0.453119318887 | gnomAD-4.0.0 | 6.84275E-07 | None | None | None | None | N | None | 2.98918E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/E | rs764248656 | 0.095 | 0.543 | N | 0.243 | 0.11 | 0.225215365344 | gnomAD-2.1.1 | 1.50167E-04 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.04939E-03 | None | 0 | None | 0 | 0 | 2.81611E-04 |
D/E | rs764248656 | 0.095 | 0.543 | N | 0.243 | 0.11 | 0.225215365344 | gnomAD-3.1.2 | 7.23E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 2.12273E-03 | None | 0 | 0 | 0 | 0 | 0 |
D/E | rs764248656 | 0.095 | 0.543 | N | 0.243 | 0.11 | 0.225215365344 | gnomAD-4.0.0 | 4.21391E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.24833E-03 | None | 0 | 0 | 0 | 2.19616E-05 | 1.60046E-04 |
D/G | rs762054067 | -0.513 | 0.989 | N | 0.587 | 0.506 | 0.433936292671 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
D/G | rs762054067 | -0.513 | 0.989 | N | 0.587 | 0.506 | 0.433936292671 | gnomAD-4.0.0 | 6.84275E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.51953E-05 | None | 0 | 0 | 0 | 0 | 0 |
D/H | rs1173109154 | 0.332 | 1.0 | D | 0.699 | 0.463 | 0.518312163451 | gnomAD-2.1.1 | 7.15E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 1.0247E-04 | None | 0 | None | 0 | 0 | 0 |
D/H | rs1173109154 | 0.332 | 1.0 | D | 0.699 | 0.463 | 0.518312163451 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92753E-04 | None | 0 | 0 | 0 | 0 | 0 |
D/H | rs1173109154 | 0.332 | 1.0 | D | 0.699 | 0.463 | 0.518312163451 | gnomAD-4.0.0 | 1.85926E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 6.68479E-05 | None | 0 | 0 | 0 | 0 | 0 |
D/V | None | None | 0.997 | N | 0.749 | 0.483 | 0.687860213003 | gnomAD-4.0.0 | 6.84275E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99549E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.5108 | ambiguous | 0.3761 | ambiguous | -0.467 | Destabilizing | 0.543 | D | 0.483 | neutral | N | 0.490247343 | None | None | N |
D/C | 0.9661 | likely_pathogenic | 0.9284 | pathogenic | -0.152 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
D/E | 0.62 | likely_pathogenic | 0.4976 | ambiguous | -0.58 | Destabilizing | 0.543 | D | 0.243 | neutral | N | 0.481983027 | None | None | N |
D/F | 0.9593 | likely_pathogenic | 0.9102 | pathogenic | 0.075 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
D/G | 0.4997 | ambiguous | 0.4025 | ambiguous | -0.891 | Destabilizing | 0.989 | D | 0.587 | neutral | N | 0.504268018 | None | None | N |
D/H | 0.8494 | likely_pathogenic | 0.7648 | pathogenic | -0.248 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | D | 0.533728579 | None | None | N |
D/I | 0.9251 | likely_pathogenic | 0.8089 | pathogenic | 0.681 | Stabilizing | 0.999 | D | 0.804 | deleterious | None | None | None | None | N |
D/K | 0.9098 | likely_pathogenic | 0.855 | pathogenic | -0.495 | Destabilizing | 0.998 | D | 0.689 | prob.neutral | None | None | None | None | N |
D/L | 0.9212 | likely_pathogenic | 0.8347 | pathogenic | 0.681 | Stabilizing | 0.998 | D | 0.779 | deleterious | None | None | None | None | N |
D/M | 0.96 | likely_pathogenic | 0.9083 | pathogenic | 1.181 | Stabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
D/N | 0.3128 | likely_benign | 0.2461 | benign | -0.953 | Destabilizing | 0.998 | D | 0.632 | neutral | N | 0.506216575 | None | None | N |
D/P | 0.9967 | likely_pathogenic | 0.992 | pathogenic | 0.324 | Stabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
D/Q | 0.8685 | likely_pathogenic | 0.7841 | pathogenic | -0.727 | Destabilizing | 0.998 | D | 0.669 | neutral | None | None | None | None | N |
D/R | 0.9331 | likely_pathogenic | 0.8819 | pathogenic | -0.355 | Destabilizing | 0.998 | D | 0.787 | deleterious | None | None | None | None | N |
D/S | 0.4347 | ambiguous | 0.3399 | benign | -1.366 | Destabilizing | 0.983 | D | 0.503 | neutral | None | None | None | None | N |
D/T | 0.7702 | likely_pathogenic | 0.6179 | pathogenic | -1.004 | Destabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | N |
D/V | 0.7803 | likely_pathogenic | 0.5741 | pathogenic | 0.324 | Stabilizing | 0.997 | D | 0.749 | deleterious | N | 0.516721868 | None | None | N |
D/W | 0.9964 | likely_pathogenic | 0.9899 | pathogenic | 0.188 | Stabilizing | 1.0 | D | 0.73 | prob.delet. | None | None | None | None | N |
D/Y | 0.821 | likely_pathogenic | 0.6937 | pathogenic | 0.326 | Stabilizing | 1.0 | D | 0.786 | deleterious | D | 0.533982068 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.