Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8253 | 24982;24983;24984 | chr2:178718349;178718348;178718347 | chr2:179583076;179583075;179583074 |
N2AB | 7936 | 24031;24032;24033 | chr2:178718349;178718348;178718347 | chr2:179583076;179583075;179583074 |
N2A | 7009 | 21250;21251;21252 | chr2:178718349;178718348;178718347 | chr2:179583076;179583075;179583074 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs376588656 | -1.321 | 0.003 | N | 0.198 | 0.133 | None | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
I/T | rs376588656 | -1.321 | 0.003 | N | 0.198 | 0.133 | None | gnomAD-4.0.0 | 1.59175E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77316E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1873 | likely_benign | 0.1912 | benign | -1.798 | Destabilizing | 0.061 | N | 0.292 | neutral | None | None | None | None | N |
I/C | 0.5251 | ambiguous | 0.521 | ambiguous | -0.908 | Destabilizing | 0.94 | D | 0.517 | neutral | None | None | None | None | N |
I/D | 0.3826 | ambiguous | 0.3807 | ambiguous | -1.149 | Destabilizing | 0.418 | N | 0.517 | neutral | None | None | None | None | N |
I/E | 0.2914 | likely_benign | 0.2885 | benign | -1.1 | Destabilizing | 0.418 | N | 0.502 | neutral | None | None | None | None | N |
I/F | 0.1049 | likely_benign | 0.1035 | benign | -1.188 | Destabilizing | 0.655 | D | 0.502 | neutral | N | 0.503043281 | None | None | N |
I/G | 0.4142 | ambiguous | 0.4073 | ambiguous | -2.17 | Highly Destabilizing | 0.264 | N | 0.487 | neutral | None | None | None | None | N |
I/H | 0.2386 | likely_benign | 0.2457 | benign | -1.329 | Destabilizing | 0.94 | D | 0.487 | neutral | None | None | None | None | N |
I/K | 0.1687 | likely_benign | 0.189 | benign | -1.11 | Destabilizing | 0.01 | N | 0.332 | neutral | None | None | None | None | N |
I/L | 0.1058 | likely_benign | 0.105 | benign | -0.825 | Destabilizing | 0.047 | N | 0.24 | neutral | N | 0.502869923 | None | None | N |
I/M | 0.0954 | likely_benign | 0.0974 | benign | -0.563 | Destabilizing | 0.655 | D | 0.469 | neutral | N | 0.484705278 | None | None | N |
I/N | 0.1266 | likely_benign | 0.1318 | benign | -0.993 | Destabilizing | 0.351 | N | 0.534 | neutral | N | 0.468583991 | None | None | N |
I/P | 0.8608 | likely_pathogenic | 0.8424 | pathogenic | -1.12 | Destabilizing | 0.593 | D | 0.577 | neutral | None | None | None | None | N |
I/Q | 0.2342 | likely_benign | 0.2422 | benign | -1.117 | Destabilizing | 0.716 | D | 0.573 | neutral | None | None | None | None | N |
I/R | 0.1243 | likely_benign | 0.1362 | benign | -0.552 | Destabilizing | 0.264 | N | 0.565 | neutral | None | None | None | None | N |
I/S | 0.1269 | likely_benign | 0.1335 | benign | -1.669 | Destabilizing | 0.003 | N | 0.299 | neutral | N | 0.41253592 | None | None | N |
I/T | 0.1079 | likely_benign | 0.115 | benign | -1.499 | Destabilizing | 0.003 | N | 0.198 | neutral | N | 0.419864538 | None | None | N |
I/V | 0.0753 | likely_benign | 0.0762 | benign | -1.12 | Destabilizing | 0.001 | N | 0.107 | neutral | N | 0.453577253 | None | None | N |
I/W | 0.5945 | likely_pathogenic | 0.5642 | pathogenic | -1.315 | Destabilizing | 0.983 | D | 0.521 | neutral | None | None | None | None | N |
I/Y | 0.2935 | likely_benign | 0.2876 | benign | -1.069 | Destabilizing | 0.836 | D | 0.567 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.