Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8254 | 24985;24986;24987 | chr2:178718346;178718345;178718344 | chr2:179583073;179583072;179583071 |
N2AB | 7937 | 24034;24035;24036 | chr2:178718346;178718345;178718344 | chr2:179583073;179583072;179583071 |
N2A | 7010 | 21253;21254;21255 | chr2:178718346;178718345;178718344 | chr2:179583073;179583072;179583071 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/G | None | None | 0.959 | N | 0.746 | 0.466 | 0.85755753267 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
C/S | rs776063057 | -1.772 | 0.476 | N | 0.548 | 0.226 | 0.670872402834 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
C/S | rs776063057 | -1.772 | 0.476 | N | 0.548 | 0.226 | 0.670872402834 | gnomAD-4.0.0 | 7.5276E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99609E-06 | 0 | 1.65667E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.612 | likely_pathogenic | 0.5371 | ambiguous | -1.992 | Destabilizing | 0.864 | D | 0.552 | neutral | None | None | None | None | N |
C/D | 0.9617 | likely_pathogenic | 0.9429 | pathogenic | -0.847 | Destabilizing | 0.991 | D | 0.797 | deleterious | None | None | None | None | N |
C/E | 0.9828 | likely_pathogenic | 0.9723 | pathogenic | -0.691 | Destabilizing | 0.991 | D | 0.798 | deleterious | None | None | None | None | N |
C/F | 0.7718 | likely_pathogenic | 0.6833 | pathogenic | -1.222 | Destabilizing | 0.068 | N | 0.641 | neutral | D | 0.532701394 | None | None | N |
C/G | 0.4443 | ambiguous | 0.355 | ambiguous | -2.337 | Highly Destabilizing | 0.959 | D | 0.746 | deleterious | N | 0.521180504 | None | None | N |
C/H | 0.9558 | likely_pathogenic | 0.9213 | pathogenic | -2.284 | Highly Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
C/I | 0.8851 | likely_pathogenic | 0.8406 | pathogenic | -1.075 | Destabilizing | 0.939 | D | 0.709 | prob.delet. | None | None | None | None | N |
C/K | 0.9938 | likely_pathogenic | 0.9889 | pathogenic | -1.281 | Destabilizing | 0.991 | D | 0.797 | deleterious | None | None | None | None | N |
C/L | 0.8574 | likely_pathogenic | 0.8008 | pathogenic | -1.075 | Destabilizing | 0.864 | D | 0.682 | prob.neutral | None | None | None | None | N |
C/M | 0.9023 | likely_pathogenic | 0.868 | pathogenic | 0.043 | Stabilizing | 0.995 | D | 0.755 | deleterious | None | None | None | None | N |
C/N | 0.9124 | likely_pathogenic | 0.8727 | pathogenic | -1.465 | Destabilizing | 0.991 | D | 0.804 | deleterious | None | None | None | None | N |
C/P | 0.9971 | likely_pathogenic | 0.9955 | pathogenic | -1.356 | Destabilizing | 0.995 | D | 0.811 | deleterious | None | None | None | None | N |
C/Q | 0.962 | likely_pathogenic | 0.9376 | pathogenic | -1.252 | Destabilizing | 0.995 | D | 0.808 | deleterious | None | None | None | None | N |
C/R | 0.9517 | likely_pathogenic | 0.9238 | pathogenic | -1.24 | Destabilizing | 0.994 | D | 0.811 | deleterious | N | 0.492440733 | None | None | N |
C/S | 0.3864 | ambiguous | 0.3125 | benign | -2.001 | Highly Destabilizing | 0.476 | N | 0.548 | neutral | N | 0.492498214 | None | None | N |
C/T | 0.5484 | ambiguous | 0.5212 | ambiguous | -1.655 | Destabilizing | 0.939 | D | 0.71 | prob.delet. | None | None | None | None | N |
C/V | 0.7786 | likely_pathogenic | 0.7189 | pathogenic | -1.356 | Destabilizing | 0.293 | N | 0.447 | neutral | None | None | None | None | N |
C/W | 0.9495 | likely_pathogenic | 0.9061 | pathogenic | -1.302 | Destabilizing | 0.999 | D | 0.724 | prob.delet. | N | 0.521940973 | None | None | N |
C/Y | 0.9195 | likely_pathogenic | 0.8656 | pathogenic | -1.28 | Destabilizing | 0.976 | D | 0.776 | deleterious | N | 0.510077689 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.