Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8255 | 24988;24989;24990 | chr2:178718343;178718342;178718341 | chr2:179583070;179583069;179583068 |
N2AB | 7938 | 24037;24038;24039 | chr2:178718343;178718342;178718341 | chr2:179583070;179583069;179583068 |
N2A | 7011 | 21256;21257;21258 | chr2:178718343;178718342;178718341 | chr2:179583070;179583069;179583068 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs794727943 | -0.376 | 0.012 | N | 0.437 | 0.145 | 0.333154297509 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1569 | likely_benign | 0.1469 | benign | -0.749 | Destabilizing | 0.012 | N | 0.437 | neutral | N | 0.517820733 | None | None | I |
E/C | 0.7952 | likely_pathogenic | 0.7749 | pathogenic | -0.153 | Destabilizing | 0.001 | N | 0.449 | neutral | None | None | None | None | I |
E/D | 0.1105 | likely_benign | 0.085 | benign | -0.7 | Destabilizing | None | N | 0.189 | neutral | N | 0.49277036 | None | None | I |
E/F | 0.6757 | likely_pathogenic | 0.6356 | pathogenic | -0.624 | Destabilizing | 0.356 | N | 0.619 | neutral | None | None | None | None | I |
E/G | 0.1425 | likely_benign | 0.1299 | benign | -1.006 | Destabilizing | None | N | 0.36 | neutral | N | 0.494152707 | None | None | I |
E/H | 0.2973 | likely_benign | 0.2778 | benign | -0.737 | Destabilizing | 0.001 | N | 0.275 | neutral | None | None | None | None | I |
E/I | 0.3968 | ambiguous | 0.3716 | ambiguous | -0.082 | Destabilizing | 0.356 | N | 0.654 | neutral | None | None | None | None | I |
E/K | 0.0995 | likely_benign | 0.1046 | benign | -0.091 | Destabilizing | 0.055 | N | 0.446 | neutral | N | 0.490863418 | None | None | I |
E/L | 0.39 | ambiguous | 0.3604 | ambiguous | -0.082 | Destabilizing | 0.072 | N | 0.61 | neutral | None | None | None | None | I |
E/M | 0.4497 | ambiguous | 0.4265 | ambiguous | 0.309 | Stabilizing | 0.864 | D | 0.599 | neutral | None | None | None | None | I |
E/N | 0.1825 | likely_benign | 0.1533 | benign | -0.407 | Destabilizing | 0.038 | N | 0.453 | neutral | None | None | None | None | I |
E/P | 0.6959 | likely_pathogenic | 0.6274 | pathogenic | -0.284 | Destabilizing | 0.356 | N | 0.63 | neutral | None | None | None | None | I |
E/Q | 0.1071 | likely_benign | 0.1114 | benign | -0.37 | Destabilizing | 0.055 | N | 0.513 | neutral | N | 0.493290435 | None | None | I |
E/R | 0.1744 | likely_benign | 0.1798 | benign | 0.06 | Stabilizing | 0.072 | N | 0.561 | neutral | None | None | None | None | I |
E/S | 0.1387 | likely_benign | 0.128 | benign | -0.629 | Destabilizing | 0.001 | N | 0.227 | neutral | None | None | None | None | I |
E/T | 0.1729 | likely_benign | 0.1625 | benign | -0.422 | Destabilizing | 0.038 | N | 0.522 | neutral | None | None | None | None | I |
E/V | 0.2342 | likely_benign | 0.2151 | benign | -0.284 | Destabilizing | 0.055 | N | 0.636 | neutral | N | 0.500989562 | None | None | I |
E/W | 0.8316 | likely_pathogenic | 0.7977 | pathogenic | -0.441 | Destabilizing | 0.864 | D | 0.627 | neutral | None | None | None | None | I |
E/Y | 0.5144 | ambiguous | 0.4627 | ambiguous | -0.38 | Destabilizing | 0.214 | N | 0.624 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.