Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8256 | 24991;24992;24993 | chr2:178718340;178718339;178718338 | chr2:179583067;179583066;179583065 |
N2AB | 7939 | 24040;24041;24042 | chr2:178718340;178718339;178718338 | chr2:179583067;179583066;179583065 |
N2A | 7012 | 21259;21260;21261 | chr2:178718340;178718339;178718338 | chr2:179583067;179583066;179583065 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/T | rs772515770 | -1.492 | 0.865 | N | 0.577 | 0.425 | 0.476051820916 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 2.9E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
A/T | rs772515770 | -1.492 | 0.865 | N | 0.577 | 0.425 | 0.476051820916 | gnomAD-4.0.0 | 1.59221E-06 | None | None | None | None | I | None | 0 | 2.28666E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
A/V | rs879112949 | None | 0.928 | N | 0.647 | 0.362 | None | gnomAD-4.0.0 | 1.59218E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.8018 | likely_pathogenic | 0.7868 | pathogenic | -1.402 | Destabilizing | 0.999 | D | 0.779 | deleterious | None | None | None | None | I |
A/D | 0.9588 | likely_pathogenic | 0.9479 | pathogenic | -2.085 | Highly Destabilizing | 0.978 | D | 0.847 | deleterious | D | 0.551079727 | None | None | I |
A/E | 0.9642 | likely_pathogenic | 0.9563 | pathogenic | -2.025 | Highly Destabilizing | 0.983 | D | 0.797 | deleterious | None | None | None | None | I |
A/F | 0.9165 | likely_pathogenic | 0.9043 | pathogenic | -1.082 | Destabilizing | 0.992 | D | 0.901 | deleterious | None | None | None | None | I |
A/G | 0.157 | likely_benign | 0.1588 | benign | -1.5 | Destabilizing | 0.865 | D | 0.525 | neutral | N | 0.490588444 | None | None | I |
A/H | 0.9763 | likely_pathogenic | 0.9745 | pathogenic | -1.734 | Destabilizing | 0.998 | D | 0.878 | deleterious | None | None | None | None | I |
A/I | 0.8625 | likely_pathogenic | 0.8056 | pathogenic | -0.294 | Destabilizing | 0.992 | D | 0.86 | deleterious | None | None | None | None | I |
A/K | 0.9875 | likely_pathogenic | 0.9869 | pathogenic | -1.409 | Destabilizing | 0.968 | D | 0.807 | deleterious | None | None | None | None | I |
A/L | 0.7856 | likely_pathogenic | 0.745 | pathogenic | -0.294 | Destabilizing | 0.944 | D | 0.739 | prob.delet. | None | None | None | None | I |
A/M | 0.7866 | likely_pathogenic | 0.7372 | pathogenic | -0.405 | Destabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | I |
A/N | 0.8917 | likely_pathogenic | 0.8847 | pathogenic | -1.41 | Destabilizing | 0.968 | D | 0.87 | deleterious | None | None | None | None | I |
A/P | 0.9918 | likely_pathogenic | 0.9883 | pathogenic | -0.536 | Destabilizing | 0.989 | D | 0.859 | deleterious | D | 0.551079727 | None | None | I |
A/Q | 0.9529 | likely_pathogenic | 0.9508 | pathogenic | -1.465 | Destabilizing | 0.983 | D | 0.868 | deleterious | None | None | None | None | I |
A/R | 0.9726 | likely_pathogenic | 0.9725 | pathogenic | -1.177 | Destabilizing | 0.983 | D | 0.861 | deleterious | None | None | None | None | I |
A/S | 0.1783 | likely_benign | 0.1847 | benign | -1.796 | Destabilizing | 0.146 | N | 0.32 | neutral | N | 0.511704439 | None | None | I |
A/T | 0.3196 | likely_benign | 0.2959 | benign | -1.63 | Destabilizing | 0.865 | D | 0.577 | neutral | N | 0.505855089 | None | None | I |
A/V | 0.5656 | likely_pathogenic | 0.4901 | ambiguous | -0.536 | Destabilizing | 0.928 | D | 0.647 | neutral | N | 0.497115222 | None | None | I |
A/W | 0.9936 | likely_pathogenic | 0.9923 | pathogenic | -1.59 | Destabilizing | 0.999 | D | 0.893 | deleterious | None | None | None | None | I |
A/Y | 0.9603 | likely_pathogenic | 0.956 | pathogenic | -1.127 | Destabilizing | 0.997 | D | 0.899 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.