Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8258 | 24997;24998;24999 | chr2:178718334;178718333;178718332 | chr2:179583061;179583060;179583059 |
N2AB | 7941 | 24046;24047;24048 | chr2:178718334;178718333;178718332 | chr2:179583061;179583060;179583059 |
N2A | 7014 | 21265;21266;21267 | chr2:178718334;178718333;178718332 | chr2:179583061;179583060;179583059 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.117 | N | 0.291 | 0.109 | 0.263140351381 | gnomAD-4.0.0 | 6.84451E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.52003E-05 | None | 0 | 0 | 0 | 0 | 0 |
V/M | None | None | 0.993 | N | 0.751 | 0.347 | 0.496693547531 | gnomAD-4.0.0 | 1.3689E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99735E-07 | 1.16015E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8417 | likely_pathogenic | 0.832 | pathogenic | -2.106 | Highly Destabilizing | 0.977 | D | 0.635 | neutral | N | 0.501720582 | None | None | N |
V/C | 0.9687 | likely_pathogenic | 0.9635 | pathogenic | -1.381 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | N |
V/D | 0.9955 | likely_pathogenic | 0.9958 | pathogenic | -2.911 | Highly Destabilizing | 0.999 | D | 0.86 | deleterious | None | None | None | None | N |
V/E | 0.9857 | likely_pathogenic | 0.9853 | pathogenic | -2.59 | Highly Destabilizing | 0.999 | D | 0.857 | deleterious | N | 0.513583867 | None | None | N |
V/F | 0.7448 | likely_pathogenic | 0.7035 | pathogenic | -1.207 | Destabilizing | 0.995 | D | 0.831 | deleterious | None | None | None | None | N |
V/G | 0.9172 | likely_pathogenic | 0.9229 | pathogenic | -2.717 | Highly Destabilizing | 0.999 | D | 0.866 | deleterious | N | 0.513583867 | None | None | N |
V/H | 0.9942 | likely_pathogenic | 0.993 | pathogenic | -2.75 | Highly Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
V/I | 0.1 | likely_benign | 0.0882 | benign | -0.333 | Destabilizing | 0.921 | D | 0.551 | neutral | None | None | None | None | N |
V/K | 0.9886 | likely_pathogenic | 0.9884 | pathogenic | -1.504 | Destabilizing | 0.998 | D | 0.851 | deleterious | None | None | None | None | N |
V/L | 0.3812 | ambiguous | 0.3102 | benign | -0.333 | Destabilizing | 0.117 | N | 0.291 | neutral | N | 0.448169702 | None | None | N |
V/M | 0.6912 | likely_pathogenic | 0.6183 | pathogenic | -0.56 | Destabilizing | 0.993 | D | 0.751 | deleterious | N | 0.512569909 | None | None | N |
V/N | 0.9841 | likely_pathogenic | 0.9847 | pathogenic | -2.17 | Highly Destabilizing | 0.999 | D | 0.872 | deleterious | None | None | None | None | N |
V/P | 0.9849 | likely_pathogenic | 0.9854 | pathogenic | -0.905 | Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
V/Q | 0.9837 | likely_pathogenic | 0.9824 | pathogenic | -1.783 | Destabilizing | 0.999 | D | 0.859 | deleterious | None | None | None | None | N |
V/R | 0.9798 | likely_pathogenic | 0.9806 | pathogenic | -1.736 | Destabilizing | 0.998 | D | 0.869 | deleterious | None | None | None | None | N |
V/S | 0.9607 | likely_pathogenic | 0.9624 | pathogenic | -2.675 | Highly Destabilizing | 0.998 | D | 0.853 | deleterious | None | None | None | None | N |
V/T | 0.9032 | likely_pathogenic | 0.9066 | pathogenic | -2.191 | Highly Destabilizing | 0.991 | D | 0.67 | neutral | None | None | None | None | N |
V/W | 0.9957 | likely_pathogenic | 0.9935 | pathogenic | -1.796 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | N |
V/Y | 0.9774 | likely_pathogenic | 0.9729 | pathogenic | -1.43 | Destabilizing | 0.999 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.