Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8260 | 25003;25004;25005 | chr2:178718328;178718327;178718326 | chr2:179583055;179583054;179583053 |
N2AB | 7943 | 24052;24053;24054 | chr2:178718328;178718327;178718326 | chr2:179583055;179583054;179583053 |
N2A | 7016 | 21271;21272;21273 | chr2:178718328;178718327;178718326 | chr2:179583055;179583054;179583053 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.939 | D | 0.603 | 0.693 | 0.784858872101 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5907 | likely_pathogenic | 0.7551 | pathogenic | -1.504 | Destabilizing | 0.939 | D | 0.603 | neutral | D | 0.607838761 | None | None | N |
V/C | 0.9191 | likely_pathogenic | 0.9525 | pathogenic | -1.421 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | N |
V/D | 0.9409 | likely_pathogenic | 0.9818 | pathogenic | -1.091 | Destabilizing | 0.997 | D | 0.715 | prob.delet. | D | 0.608444174 | None | None | N |
V/E | 0.8711 | likely_pathogenic | 0.9488 | pathogenic | -1.028 | Destabilizing | 0.998 | D | 0.692 | prob.neutral | None | None | None | None | N |
V/F | 0.522 | ambiguous | 0.6631 | pathogenic | -1.117 | Destabilizing | 0.982 | D | 0.703 | prob.neutral | D | 0.607838761 | None | None | N |
V/G | 0.7205 | likely_pathogenic | 0.861 | pathogenic | -1.844 | Destabilizing | 0.997 | D | 0.694 | prob.neutral | D | 0.608444174 | None | None | N |
V/H | 0.95 | likely_pathogenic | 0.981 | pathogenic | -1.352 | Destabilizing | 0.999 | D | 0.7 | prob.neutral | None | None | None | None | N |
V/I | 0.0853 | likely_benign | 0.0818 | benign | -0.64 | Destabilizing | 0.046 | N | 0.461 | neutral | N | 0.502939786 | None | None | N |
V/K | 0.8788 | likely_pathogenic | 0.9552 | pathogenic | -0.939 | Destabilizing | 0.993 | D | 0.692 | prob.neutral | None | None | None | None | N |
V/L | 0.4116 | ambiguous | 0.5111 | ambiguous | -0.64 | Destabilizing | 0.76 | D | 0.639 | neutral | D | 0.564031081 | None | None | N |
V/M | 0.376 | ambiguous | 0.4765 | ambiguous | -0.824 | Destabilizing | 0.986 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/N | 0.811 | likely_pathogenic | 0.9158 | pathogenic | -0.875 | Destabilizing | 0.998 | D | 0.721 | prob.delet. | None | None | None | None | N |
V/P | 0.865 | likely_pathogenic | 0.9383 | pathogenic | -0.896 | Destabilizing | 0.998 | D | 0.704 | prob.neutral | None | None | None | None | N |
V/Q | 0.8683 | likely_pathogenic | 0.9468 | pathogenic | -0.972 | Destabilizing | 0.998 | D | 0.713 | prob.delet. | None | None | None | None | N |
V/R | 0.8455 | likely_pathogenic | 0.9438 | pathogenic | -0.671 | Destabilizing | 0.998 | D | 0.719 | prob.delet. | None | None | None | None | N |
V/S | 0.7133 | likely_pathogenic | 0.8542 | pathogenic | -1.554 | Destabilizing | 0.993 | D | 0.669 | neutral | None | None | None | None | N |
V/T | 0.5201 | ambiguous | 0.6362 | pathogenic | -1.373 | Destabilizing | 0.953 | D | 0.67 | neutral | None | None | None | None | N |
V/W | 0.9817 | likely_pathogenic | 0.9915 | pathogenic | -1.274 | Destabilizing | 0.999 | D | 0.669 | neutral | None | None | None | None | N |
V/Y | 0.9188 | likely_pathogenic | 0.9655 | pathogenic | -0.936 | Destabilizing | 0.998 | D | 0.707 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.