Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8265 | 25018;25019;25020 | chr2:178718213;178718212;178718211 | chr2:179582940;179582939;179582938 |
N2AB | 7948 | 24067;24068;24069 | chr2:178718213;178718212;178718211 | chr2:179582940;179582939;179582938 |
N2A | 7021 | 21286;21287;21288 | chr2:178718213;178718212;178718211 | chr2:179582940;179582939;179582938 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/N | None | None | 0.997 | N | 0.552 | 0.306 | 0.554721145582 | gnomAD-4.0.0 | 1.6283E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89039E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.5959 | likely_pathogenic | 0.6185 | pathogenic | -1.509 | Destabilizing | 0.985 | D | 0.507 | neutral | None | None | None | None | N |
Y/C | 0.2251 | likely_benign | 0.2654 | benign | -0.593 | Destabilizing | 1.0 | D | 0.547 | neutral | N | 0.503316512 | None | None | N |
Y/D | 0.6137 | likely_pathogenic | 0.6754 | pathogenic | 0.054 | Stabilizing | 0.997 | D | 0.557 | neutral | N | 0.507814383 | None | None | N |
Y/E | 0.7689 | likely_pathogenic | 0.7932 | pathogenic | 0.12 | Stabilizing | 0.985 | D | 0.529 | neutral | None | None | None | None | N |
Y/F | 0.1179 | likely_benign | 0.108 | benign | -0.492 | Destabilizing | 0.924 | D | 0.491 | neutral | N | 0.464063606 | None | None | N |
Y/G | 0.66 | likely_pathogenic | 0.6875 | pathogenic | -1.78 | Destabilizing | 0.993 | D | 0.546 | neutral | None | None | None | None | N |
Y/H | 0.2258 | likely_benign | 0.2354 | benign | -0.223 | Destabilizing | 0.997 | D | 0.517 | neutral | N | 0.473683167 | None | None | N |
Y/I | 0.5216 | ambiguous | 0.5389 | ambiguous | -0.725 | Destabilizing | 0.074 | N | 0.297 | neutral | None | None | None | None | N |
Y/K | 0.6419 | likely_pathogenic | 0.6789 | pathogenic | -0.686 | Destabilizing | 0.097 | N | 0.343 | neutral | None | None | None | None | N |
Y/L | 0.593 | likely_pathogenic | 0.6235 | pathogenic | -0.725 | Destabilizing | 0.347 | N | 0.455 | neutral | None | None | None | None | N |
Y/M | 0.7435 | likely_pathogenic | 0.7538 | pathogenic | -0.622 | Destabilizing | 0.993 | D | 0.505 | neutral | None | None | None | None | N |
Y/N | 0.3341 | likely_benign | 0.3739 | ambiguous | -1.108 | Destabilizing | 0.997 | D | 0.552 | neutral | N | 0.497040029 | None | None | N |
Y/P | 0.9892 | likely_pathogenic | 0.9905 | pathogenic | -0.976 | Destabilizing | 0.999 | D | 0.565 | neutral | None | None | None | None | N |
Y/Q | 0.5758 | likely_pathogenic | 0.6036 | pathogenic | -0.966 | Destabilizing | 0.986 | D | 0.517 | neutral | None | None | None | None | N |
Y/R | 0.3784 | ambiguous | 0.397 | ambiguous | -0.37 | Destabilizing | 0.98 | D | 0.544 | neutral | None | None | None | None | N |
Y/S | 0.263 | likely_benign | 0.2796 | benign | -1.588 | Destabilizing | 0.962 | D | 0.521 | neutral | N | 0.45092095 | None | None | N |
Y/T | 0.4627 | ambiguous | 0.4798 | ambiguous | -1.428 | Destabilizing | 0.471 | N | 0.343 | neutral | None | None | None | None | N |
Y/V | 0.3765 | ambiguous | 0.3817 | ambiguous | -0.976 | Destabilizing | 0.932 | D | 0.469 | neutral | None | None | None | None | N |
Y/W | 0.5529 | ambiguous | 0.5482 | ambiguous | -0.263 | Destabilizing | 1.0 | D | 0.514 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.