Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8269 | 25030;25031;25032 | chr2:178718201;178718200;178718199 | chr2:179582928;179582927;179582926 |
N2AB | 7952 | 24079;24080;24081 | chr2:178718201;178718200;178718199 | chr2:179582928;179582927;179582926 |
N2A | 7025 | 21298;21299;21300 | chr2:178718201;178718200;178718199 | chr2:179582928;179582927;179582926 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs960099770 | None | 0.011 | N | 0.412 | 0.239 | None | gnomAD-4.0.0 | 1.62141E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.04507E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1015 | likely_benign | 0.1097 | benign | -0.974 | Destabilizing | 0.025 | N | 0.335 | neutral | N | 0.489080733 | None | None | N |
P/C | 0.6043 | likely_pathogenic | 0.6656 | pathogenic | -0.619 | Destabilizing | 0.968 | D | 0.504 | neutral | None | None | None | None | N |
P/D | 0.3849 | ambiguous | 0.4405 | ambiguous | -0.532 | Destabilizing | None | N | 0.313 | neutral | None | None | None | None | N |
P/E | 0.2352 | likely_benign | 0.2624 | benign | -0.586 | Destabilizing | 0.029 | N | 0.437 | neutral | None | None | None | None | N |
P/F | 0.5255 | ambiguous | 0.5625 | ambiguous | -0.831 | Destabilizing | 0.891 | D | 0.553 | neutral | None | None | None | None | N |
P/G | 0.3277 | likely_benign | 0.3504 | ambiguous | -1.219 | Destabilizing | 0.279 | N | 0.441 | neutral | None | None | None | None | N |
P/H | 0.1624 | likely_benign | 0.1755 | benign | -0.732 | Destabilizing | 0.009 | N | 0.341 | neutral | D | 0.533102403 | None | None | N |
P/I | 0.3923 | ambiguous | 0.4292 | ambiguous | -0.441 | Destabilizing | 0.699 | D | 0.518 | neutral | None | None | None | None | N |
P/K | 0.2145 | likely_benign | 0.2336 | benign | -0.767 | Destabilizing | 0.059 | N | 0.305 | neutral | None | None | None | None | N |
P/L | 0.1476 | likely_benign | 0.1668 | benign | -0.441 | Destabilizing | 0.011 | N | 0.412 | neutral | N | 0.492043248 | None | None | N |
P/M | 0.3584 | ambiguous | 0.3895 | ambiguous | -0.365 | Destabilizing | 0.859 | D | 0.523 | neutral | None | None | None | None | N |
P/N | 0.2875 | likely_benign | 0.3177 | benign | -0.46 | Destabilizing | 0.366 | N | 0.526 | neutral | None | None | None | None | N |
P/Q | 0.1399 | likely_benign | 0.1518 | benign | -0.664 | Destabilizing | 0.635 | D | 0.549 | neutral | None | None | None | None | N |
P/R | 0.144 | likely_benign | 0.1509 | benign | -0.251 | Destabilizing | 0.637 | D | 0.583 | neutral | N | 0.503856932 | None | None | N |
P/S | 0.1402 | likely_benign | 0.154 | benign | -0.935 | Destabilizing | 0.016 | N | 0.201 | neutral | D | 0.523538771 | None | None | N |
P/T | 0.1171 | likely_benign | 0.1316 | benign | -0.883 | Destabilizing | 0.006 | N | 0.275 | neutral | D | 0.535910635 | None | None | N |
P/V | 0.2665 | likely_benign | 0.2931 | benign | -0.582 | Destabilizing | 0.011 | N | 0.377 | neutral | None | None | None | None | N |
P/W | 0.6879 | likely_pathogenic | 0.7191 | pathogenic | -0.954 | Destabilizing | 0.997 | D | 0.539 | neutral | None | None | None | None | N |
P/Y | 0.4155 | ambiguous | 0.4473 | ambiguous | -0.668 | Destabilizing | 0.942 | D | 0.578 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.