Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8271 | 25036;25037;25038 | chr2:178718195;178718194;178718193 | chr2:179582922;179582921;179582920 |
N2AB | 7954 | 24085;24086;24087 | chr2:178718195;178718194;178718193 | chr2:179582922;179582921;179582920 |
N2A | 7027 | 21304;21305;21306 | chr2:178718195;178718194;178718193 | chr2:179582922;179582921;179582920 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.002 | N | 0.192 | 0.174 | 0.260249123532 | gnomAD-4.0.0 | 4.13603E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.65452E-05 | 3.32303E-05 |
E/Q | None | None | None | N | 0.173 | 0.106 | 0.264547087235 | gnomAD-4.0.0 | 6.89338E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.16363E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1181 | likely_benign | 0.1225 | benign | -0.393 | Destabilizing | None | N | 0.128 | neutral | N | 0.504448791 | None | None | I |
E/C | 0.7403 | likely_pathogenic | 0.7675 | pathogenic | -0.313 | Destabilizing | 0.685 | D | 0.31 | neutral | None | None | None | None | I |
E/D | 0.1486 | likely_benign | 0.1432 | benign | -0.334 | Destabilizing | None | N | 0.187 | neutral | N | 0.520340963 | None | None | I |
E/F | 0.6634 | likely_pathogenic | 0.6838 | pathogenic | -0.18 | Destabilizing | 0.516 | D | 0.326 | neutral | None | None | None | None | I |
E/G | 0.108 | likely_benign | 0.1193 | benign | -0.599 | Destabilizing | 0.001 | N | 0.213 | neutral | D | 0.523727985 | None | None | I |
E/H | 0.3 | likely_benign | 0.3192 | benign | 0.144 | Stabilizing | 0.273 | N | 0.367 | neutral | None | None | None | None | I |
E/I | 0.3167 | likely_benign | 0.3088 | benign | 0.123 | Stabilizing | 0.198 | N | 0.351 | neutral | None | None | None | None | I |
E/K | 0.0827 | likely_benign | 0.0927 | benign | 0.012 | Stabilizing | 0.002 | N | 0.192 | neutral | N | 0.469005279 | None | None | I |
E/L | 0.2769 | likely_benign | 0.2945 | benign | 0.123 | Stabilizing | 0.034 | N | 0.381 | neutral | None | None | None | None | I |
E/M | 0.3971 | ambiguous | 0.4014 | ambiguous | 0.048 | Stabilizing | 0.252 | N | 0.32 | neutral | None | None | None | None | I |
E/N | 0.1981 | likely_benign | 0.1952 | benign | -0.232 | Destabilizing | 0.016 | N | 0.341 | neutral | None | None | None | None | I |
E/P | 0.4257 | ambiguous | 0.5286 | ambiguous | -0.03 | Destabilizing | 0.069 | N | 0.362 | neutral | None | None | None | None | I |
E/Q | 0.0795 | likely_benign | 0.0853 | benign | -0.185 | Destabilizing | None | N | 0.173 | neutral | N | 0.471258937 | None | None | I |
E/R | 0.1395 | likely_benign | 0.1609 | benign | 0.353 | Stabilizing | 0.07 | N | 0.339 | neutral | None | None | None | None | I |
E/S | 0.1457 | likely_benign | 0.146 | benign | -0.439 | Destabilizing | 0.016 | N | 0.319 | neutral | None | None | None | None | I |
E/T | 0.1719 | likely_benign | 0.1717 | benign | -0.275 | Destabilizing | 0.053 | N | 0.343 | neutral | None | None | None | None | I |
E/V | 0.1795 | likely_benign | 0.1752 | benign | -0.03 | Destabilizing | 0.018 | N | 0.366 | neutral | D | 0.522207832 | None | None | I |
E/W | 0.8093 | likely_pathogenic | 0.8434 | pathogenic | -0.026 | Destabilizing | 0.97 | D | 0.439 | neutral | None | None | None | None | I |
E/Y | 0.5044 | ambiguous | 0.53 | ambiguous | 0.048 | Stabilizing | 0.74 | D | 0.335 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.