Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8273 | 25042;25043;25044 | chr2:178718189;178718188;178718187 | chr2:179582916;179582915;179582914 |
N2AB | 7956 | 24091;24092;24093 | chr2:178718189;178718188;178718187 | chr2:179582916;179582915;179582914 |
N2A | 7029 | 21310;21311;21312 | chr2:178718189;178718188;178718187 | chr2:179582916;179582915;179582914 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | 0.002 | D | 0.103 | 0.177 | 0.498705051145 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
V/M | None | None | 0.005 | N | 0.265 | 0.134 | 0.183819452728 | gnomAD-4.0.0 | 1.61611E-06 | None | None | None | None | N | None | 0 | 2.29474E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1606 | likely_benign | 0.1582 | benign | -1.216 | Destabilizing | 0.002 | N | 0.103 | neutral | D | 0.522191976 | None | None | N |
V/C | 0.7045 | likely_pathogenic | 0.7179 | pathogenic | -0.801 | Destabilizing | 0.724 | D | 0.456 | neutral | None | None | None | None | N |
V/D | 0.4151 | ambiguous | 0.4232 | ambiguous | -1.036 | Destabilizing | 0.475 | N | 0.547 | neutral | None | None | None | None | N |
V/E | 0.2712 | likely_benign | 0.2516 | benign | -1.056 | Destabilizing | 0.1 | N | 0.497 | neutral | N | 0.507642742 | None | None | N |
V/F | 0.1614 | likely_benign | 0.1637 | benign | -0.943 | Destabilizing | 0.705 | D | 0.507 | neutral | None | None | None | None | N |
V/G | 0.2517 | likely_benign | 0.2715 | benign | -1.505 | Destabilizing | 0.003 | N | 0.371 | neutral | D | 0.53158312 | None | None | N |
V/H | 0.4927 | ambiguous | 0.4848 | ambiguous | -1.092 | Destabilizing | 0.976 | D | 0.525 | neutral | None | None | None | None | N |
V/I | 0.0765 | likely_benign | 0.0723 | benign | -0.536 | Destabilizing | None | N | 0.176 | neutral | None | None | None | None | N |
V/K | 0.2323 | likely_benign | 0.2218 | benign | -1.145 | Destabilizing | 0.242 | N | 0.497 | neutral | None | None | None | None | N |
V/L | 0.1764 | likely_benign | 0.1648 | benign | -0.536 | Destabilizing | 0.001 | N | 0.289 | neutral | N | 0.520613109 | None | None | N |
V/M | 0.119 | likely_benign | 0.1108 | benign | -0.434 | Destabilizing | 0.005 | N | 0.265 | neutral | N | 0.490828707 | None | None | N |
V/N | 0.3284 | likely_benign | 0.3131 | benign | -0.882 | Destabilizing | 0.045 | N | 0.56 | neutral | None | None | None | None | N |
V/P | 0.7891 | likely_pathogenic | 0.8198 | pathogenic | -0.727 | Destabilizing | 0.253 | N | 0.562 | neutral | None | None | None | None | N |
V/Q | 0.2452 | likely_benign | 0.2319 | benign | -1.05 | Destabilizing | 0.617 | D | 0.545 | neutral | None | None | None | None | N |
V/R | 0.1963 | likely_benign | 0.2002 | benign | -0.634 | Destabilizing | 0.705 | D | 0.578 | neutral | None | None | None | None | N |
V/S | 0.2306 | likely_benign | 0.2246 | benign | -1.342 | Destabilizing | 0.014 | N | 0.351 | neutral | None | None | None | None | N |
V/T | 0.1487 | likely_benign | 0.1332 | benign | -1.256 | Destabilizing | None | N | 0.103 | neutral | None | None | None | None | N |
V/W | 0.6951 | likely_pathogenic | 0.7157 | pathogenic | -1.133 | Destabilizing | 0.993 | D | 0.559 | neutral | None | None | None | None | N |
V/Y | 0.4939 | ambiguous | 0.4816 | ambiguous | -0.844 | Destabilizing | 0.829 | D | 0.463 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.