Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8277 | 25054;25055;25056 | chr2:178718177;178718176;178718175 | chr2:179582904;179582903;179582902 |
N2AB | 7960 | 24103;24104;24105 | chr2:178718177;178718176;178718175 | chr2:179582904;179582903;179582902 |
N2A | 7033 | 21322;21323;21324 | chr2:178718177;178718176;178718175 | chr2:179582904;179582903;179582902 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs745818162 | -0.48 | 0.074 | N | 0.383 | 0.135 | 0.527404433557 | gnomAD-2.1.1 | 1.1E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 5.14E-05 | None | 0 | None | 5.09E-05 | 7.83E-06 | 0 |
I/T | rs745818162 | -0.48 | 0.074 | N | 0.383 | 0.135 | 0.527404433557 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07039E-04 | 0 |
I/T | rs745818162 | -0.48 | 0.074 | N | 0.383 | 0.135 | 0.527404433557 | gnomAD-4.0.0 | 7.7693E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 7.27237E-05 | None | 0 | 0 | 2.39584E-06 | 1.3416E-05 | 2.85063E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.1295 | likely_benign | 0.1315 | benign | -1.336 | Destabilizing | 0.126 | N | 0.373 | neutral | None | None | None | None | I |
I/C | 0.6555 | likely_pathogenic | 0.6619 | pathogenic | -0.581 | Destabilizing | 0.833 | D | 0.326 | neutral | None | None | None | None | I |
I/D | 0.4674 | ambiguous | 0.4922 | ambiguous | -1.017 | Destabilizing | 0.833 | D | 0.402 | neutral | None | None | None | None | I |
I/E | 0.3246 | likely_benign | 0.3318 | benign | -1.053 | Destabilizing | 0.786 | D | 0.415 | neutral | None | None | None | None | I |
I/F | 0.1341 | likely_benign | 0.1417 | benign | -1.036 | Destabilizing | 0.001 | N | 0.129 | neutral | N | 0.484909542 | None | None | I |
I/G | 0.4988 | ambiguous | 0.5021 | ambiguous | -1.606 | Destabilizing | 0.587 | D | 0.425 | neutral | None | None | None | None | I |
I/H | 0.4197 | ambiguous | 0.4398 | ambiguous | -0.892 | Destabilizing | 0.96 | D | 0.346 | neutral | None | None | None | None | I |
I/K | 0.2799 | likely_benign | 0.303 | benign | -0.929 | Destabilizing | 0.04 | N | 0.423 | neutral | None | None | None | None | I |
I/L | 0.0979 | likely_benign | 0.0862 | benign | -0.685 | Destabilizing | None | N | 0.11 | neutral | N | 0.478166267 | None | None | I |
I/M | 0.0893 | likely_benign | 0.0821 | benign | -0.459 | Destabilizing | 0.181 | N | 0.354 | neutral | N | 0.51583922 | None | None | I |
I/N | 0.227 | likely_benign | 0.2339 | benign | -0.615 | Destabilizing | 0.92 | D | 0.382 | neutral | N | 0.499544304 | None | None | I |
I/P | 0.3116 | likely_benign | 0.3092 | benign | -0.87 | Destabilizing | 0.938 | D | 0.395 | neutral | None | None | None | None | I |
I/Q | 0.3004 | likely_benign | 0.3093 | benign | -0.833 | Destabilizing | 0.863 | D | 0.371 | neutral | None | None | None | None | I |
I/R | 0.1951 | likely_benign | 0.2181 | benign | -0.302 | Destabilizing | 0.664 | D | 0.384 | neutral | None | None | None | None | I |
I/S | 0.1751 | likely_benign | 0.1803 | benign | -1.089 | Destabilizing | 0.346 | N | 0.403 | neutral | N | 0.494327798 | None | None | I |
I/T | 0.0905 | likely_benign | 0.089 | benign | -1.018 | Destabilizing | 0.074 | N | 0.383 | neutral | N | 0.496482669 | None | None | I |
I/V | 0.075 | likely_benign | 0.0716 | benign | -0.87 | Destabilizing | None | N | 0.101 | neutral | N | 0.413247996 | None | None | I |
I/W | 0.6085 | likely_pathogenic | 0.6411 | pathogenic | -1.107 | Destabilizing | 0.988 | D | 0.349 | neutral | None | None | None | None | I |
I/Y | 0.4503 | ambiguous | 0.4663 | ambiguous | -0.895 | Destabilizing | 0.016 | N | 0.408 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.