Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8281 | 25066;25067;25068 | chr2:178718165;178718164;178718163 | chr2:179582892;179582891;179582890 |
N2AB | 7964 | 24115;24116;24117 | chr2:178718165;178718164;178718163 | chr2:179582892;179582891;179582890 |
N2A | 7037 | 21334;21335;21336 | chr2:178718165;178718164;178718163 | chr2:179582892;179582891;179582890 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/E | rs1474165122 | -1.112 | 0.055 | D | 0.689 | 0.374 | 0.186928172975 | gnomAD-2.1.1 | 8.22E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.55E-05 | None | 0 | 0 | 0 |
A/E | rs1474165122 | -1.112 | 0.055 | D | 0.689 | 0.374 | 0.186928172975 | gnomAD-4.0.0 | 4.83065E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.30108E-05 | 0 |
A/T | rs2077783832 | None | None | N | 0.183 | 0.211 | 0.0401082797425 | gnomAD-4.0.0 | 1.61075E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86054E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4588 | ambiguous | 0.4356 | ambiguous | -0.903 | Destabilizing | 0.676 | D | 0.664 | neutral | None | None | None | None | I |
A/D | 0.7123 | likely_pathogenic | 0.8112 | pathogenic | -0.942 | Destabilizing | 0.214 | N | 0.739 | prob.delet. | None | None | None | None | I |
A/E | 0.5176 | ambiguous | 0.6234 | pathogenic | -0.937 | Destabilizing | 0.055 | N | 0.689 | prob.neutral | D | 0.54967783 | None | None | I |
A/F | 0.342 | ambiguous | 0.3706 | ambiguous | -0.793 | Destabilizing | 0.214 | N | 0.734 | prob.delet. | None | None | None | None | I |
A/G | 0.2845 | likely_benign | 0.3171 | benign | -1.094 | Destabilizing | 0.055 | N | 0.591 | neutral | N | 0.494453239 | None | None | I |
A/H | 0.6964 | likely_pathogenic | 0.7718 | pathogenic | -1.273 | Destabilizing | 0.864 | D | 0.689 | prob.neutral | None | None | None | None | I |
A/I | 0.1455 | likely_benign | 0.1217 | benign | -0.118 | Destabilizing | None | N | 0.461 | neutral | None | None | None | None | I |
A/K | 0.6177 | likely_pathogenic | 0.7173 | pathogenic | -1.159 | Destabilizing | 0.072 | N | 0.691 | prob.neutral | None | None | None | None | I |
A/L | 0.1356 | likely_benign | 0.134 | benign | -0.118 | Destabilizing | None | N | 0.405 | neutral | None | None | None | None | I |
A/M | 0.1826 | likely_benign | 0.1722 | benign | -0.188 | Destabilizing | 0.214 | N | 0.716 | prob.delet. | None | None | None | None | I |
A/N | 0.5371 | ambiguous | 0.6149 | pathogenic | -0.946 | Destabilizing | 0.214 | N | 0.735 | prob.delet. | None | None | None | None | I |
A/P | 0.8175 | likely_pathogenic | 0.8828 | pathogenic | -0.299 | Destabilizing | None | N | 0.467 | neutral | D | 0.538321524 | None | None | I |
A/Q | 0.5156 | ambiguous | 0.6084 | pathogenic | -1.018 | Destabilizing | 0.356 | N | 0.75 | deleterious | None | None | None | None | I |
A/R | 0.5227 | ambiguous | 0.6329 | pathogenic | -0.905 | Destabilizing | 0.214 | N | 0.751 | deleterious | None | None | None | None | I |
A/S | 0.1601 | likely_benign | 0.1813 | benign | -1.351 | Destabilizing | 0.012 | N | 0.551 | neutral | N | 0.51971029 | None | None | I |
A/T | 0.076 | likely_benign | 0.0736 | benign | -1.233 | Destabilizing | None | N | 0.183 | neutral | N | 0.493199018 | None | None | I |
A/V | 0.074 | likely_benign | 0.0642 | benign | -0.299 | Destabilizing | None | N | 0.227 | neutral | N | 0.450539735 | None | None | I |
A/W | 0.802 | likely_pathogenic | 0.8486 | pathogenic | -1.196 | Destabilizing | 0.864 | D | 0.722 | prob.delet. | None | None | None | None | I |
A/Y | 0.5939 | likely_pathogenic | 0.6507 | pathogenic | -0.749 | Destabilizing | 0.356 | N | 0.739 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.