Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8282 | 25069;25070;25071 | chr2:178718162;178718161;178718160 | chr2:179582889;179582888;179582887 |
N2AB | 7965 | 24118;24119;24120 | chr2:178718162;178718161;178718160 | chr2:179582889;179582888;179582887 |
N2A | 7038 | 21337;21338;21339 | chr2:178718162;178718161;178718160 | chr2:179582889;179582888;179582887 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs2077783131 | None | 0.002 | D | 0.302 | 0.234 | 0.202949470691 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
T/I | None | None | 0.685 | N | 0.507 | 0.232 | 0.452264262256 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0839 | likely_benign | 0.0892 | benign | -0.539 | Destabilizing | 0.002 | N | 0.302 | neutral | D | 0.535566705 | None | None | I |
T/C | 0.4329 | ambiguous | 0.4208 | ambiguous | -0.445 | Destabilizing | 0.997 | D | 0.557 | neutral | None | None | None | None | I |
T/D | 0.4564 | ambiguous | 0.471 | ambiguous | 0.258 | Stabilizing | 0.382 | N | 0.499 | neutral | None | None | None | None | I |
T/E | 0.2874 | likely_benign | 0.3016 | benign | 0.256 | Stabilizing | 0.804 | D | 0.512 | neutral | None | None | None | None | I |
T/F | 0.1577 | likely_benign | 0.1474 | benign | -0.711 | Destabilizing | 0.964 | D | 0.604 | neutral | None | None | None | None | I |
T/G | 0.329 | likely_benign | 0.3418 | ambiguous | -0.774 | Destabilizing | 0.681 | D | 0.516 | neutral | None | None | None | None | I |
T/H | 0.2047 | likely_benign | 0.2113 | benign | -0.966 | Destabilizing | 0.976 | D | 0.578 | neutral | None | None | None | None | I |
T/I | 0.0992 | likely_benign | 0.0874 | benign | -0.016 | Destabilizing | 0.685 | D | 0.507 | neutral | N | 0.517095588 | None | None | I |
T/K | 0.1738 | likely_benign | 0.1969 | benign | -0.457 | Destabilizing | 0.852 | D | 0.511 | neutral | None | None | None | None | I |
T/L | 0.0762 | likely_benign | 0.0773 | benign | -0.016 | Destabilizing | 0.543 | D | 0.475 | neutral | None | None | None | None | I |
T/M | 0.0832 | likely_benign | 0.0798 | benign | -0.014 | Destabilizing | 0.976 | D | 0.565 | neutral | None | None | None | None | I |
T/N | 0.1362 | likely_benign | 0.1341 | benign | -0.434 | Destabilizing | 0.012 | N | 0.427 | neutral | D | 0.541300599 | None | None | I |
T/P | 0.2838 | likely_benign | 0.3601 | ambiguous | -0.157 | Destabilizing | 0.869 | D | 0.589 | neutral | D | 0.534940936 | None | None | I |
T/Q | 0.1962 | likely_benign | 0.2145 | benign | -0.521 | Destabilizing | 0.95 | D | 0.597 | neutral | None | None | None | None | I |
T/R | 0.1314 | likely_benign | 0.1527 | benign | -0.272 | Destabilizing | 0.982 | D | 0.588 | neutral | None | None | None | None | I |
T/S | 0.1111 | likely_benign | 0.1102 | benign | -0.72 | Destabilizing | 0.004 | N | 0.349 | neutral | N | 0.471304583 | None | None | I |
T/V | 0.0892 | likely_benign | 0.078 | benign | -0.157 | Destabilizing | 0.005 | N | 0.322 | neutral | None | None | None | None | I |
T/W | 0.5159 | ambiguous | 0.5346 | ambiguous | -0.701 | Destabilizing | 0.999 | D | 0.577 | neutral | None | None | None | None | I |
T/Y | 0.1971 | likely_benign | 0.1962 | benign | -0.421 | Destabilizing | 0.171 | N | 0.528 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.