Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8283 | 25072;25073;25074 | chr2:178718159;178718158;178718157 | chr2:179582886;179582885;179582884 |
N2AB | 7966 | 24121;24122;24123 | chr2:178718159;178718158;178718157 | chr2:179582886;179582885;179582884 |
N2A | 7039 | 21340;21341;21342 | chr2:178718159;178718158;178718157 | chr2:179582886;179582885;179582884 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | rs1454021604 | None | 0.429 | D | 0.333 | 0.465 | 0.328222422547 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
L/F | rs1454021604 | None | 0.429 | D | 0.333 | 0.465 | 0.328222422547 | gnomAD-4.0.0 | 3.73346E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.08646E-06 | 0 | 0 |
L/V | rs1408912599 | None | 0.959 | D | 0.663 | 0.64 | 0.738333703548 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
L/V | rs1408912599 | None | 0.959 | D | 0.663 | 0.64 | 0.738333703548 | gnomAD-4.0.0 | 6.57151E-06 | None | None | None | None | N | None | 2.41266E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.9383 | likely_pathogenic | 0.9595 | pathogenic | -2.487 | Highly Destabilizing | 0.999 | D | 0.739 | prob.delet. | None | None | None | None | N |
L/C | 0.9378 | likely_pathogenic | 0.9488 | pathogenic | -1.785 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
L/D | 0.9982 | likely_pathogenic | 0.999 | pathogenic | -3.0 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
L/E | 0.9893 | likely_pathogenic | 0.9938 | pathogenic | -2.689 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
L/F | 0.1026 | likely_benign | 0.0831 | benign | -1.427 | Destabilizing | 0.429 | N | 0.333 | neutral | D | 0.534938589 | None | None | N |
L/G | 0.9837 | likely_pathogenic | 0.9904 | pathogenic | -3.101 | Highly Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | N |
L/H | 0.9364 | likely_pathogenic | 0.9572 | pathogenic | -2.673 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | None | None | None | None | N |
L/I | 0.1928 | likely_benign | 0.174 | benign | -0.664 | Destabilizing | 0.947 | D | 0.628 | neutral | D | 0.562404134 | None | None | N |
L/K | 0.9749 | likely_pathogenic | 0.9847 | pathogenic | -1.894 | Destabilizing | 0.998 | D | 0.875 | deleterious | None | None | None | None | N |
L/M | 0.2498 | likely_benign | 0.2444 | benign | -0.776 | Destabilizing | 1.0 | D | 0.687 | prob.neutral | None | None | None | None | N |
L/N | 0.9912 | likely_pathogenic | 0.9947 | pathogenic | -2.491 | Highly Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
L/P | 0.9887 | likely_pathogenic | 0.9945 | pathogenic | -1.259 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
L/Q | 0.9376 | likely_pathogenic | 0.9638 | pathogenic | -2.182 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
L/R | 0.9417 | likely_pathogenic | 0.9633 | pathogenic | -1.935 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | N |
L/S | 0.9798 | likely_pathogenic | 0.988 | pathogenic | -3.156 | Highly Destabilizing | 1.0 | D | 0.867 | deleterious | D | 0.654491343 | None | None | N |
L/T | 0.9625 | likely_pathogenic | 0.9767 | pathogenic | -2.671 | Highly Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
L/V | 0.2984 | likely_benign | 0.315 | benign | -1.259 | Destabilizing | 0.959 | D | 0.663 | neutral | D | 0.611723045 | None | None | N |
L/W | 0.5637 | ambiguous | 0.6116 | pathogenic | -1.806 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
L/Y | 0.7433 | likely_pathogenic | 0.7319 | pathogenic | -1.516 | Destabilizing | 0.985 | D | 0.782 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.