Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8284 | 25075;25076;25077 | chr2:178718156;178718155;178718154 | chr2:179582883;179582882;179582881 |
N2AB | 7967 | 24124;24125;24126 | chr2:178718156;178718155;178718154 | chr2:179582883;179582882;179582881 |
N2A | 7040 | 21343;21344;21345 | chr2:178718156;178718155;178718154 | chr2:179582883;179582882;179582881 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/E | None | None | 0.001 | N | 0.229 | 0.164 | 0.188950314367 | gnomAD-4.0.0 | 2.40066E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.62502E-06 | 0 | 0 |
Q/L | None | None | 0.269 | N | 0.514 | 0.209 | 0.442054744378 | gnomAD-4.0.0 | 3.21576E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.71948E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.29 | likely_benign | 0.2994 | benign | -0.629 | Destabilizing | 0.336 | N | 0.427 | neutral | None | None | None | None | N |
Q/C | 0.662 | likely_pathogenic | 0.6195 | pathogenic | -0.018 | Destabilizing | 0.968 | D | 0.55 | neutral | None | None | None | None | N |
Q/D | 0.5105 | ambiguous | 0.5528 | ambiguous | -0.385 | Destabilizing | 0.071 | N | 0.409 | neutral | None | None | None | None | N |
Q/E | 0.106 | likely_benign | 0.1042 | benign | -0.299 | Destabilizing | 0.001 | N | 0.229 | neutral | N | 0.391219286 | None | None | N |
Q/F | 0.6508 | likely_pathogenic | 0.6024 | pathogenic | -0.34 | Destabilizing | 0.937 | D | 0.556 | neutral | None | None | None | None | N |
Q/G | 0.4178 | ambiguous | 0.4235 | ambiguous | -0.975 | Destabilizing | 0.551 | D | 0.506 | neutral | None | None | None | None | N |
Q/H | 0.2027 | likely_benign | 0.1963 | benign | -0.751 | Destabilizing | 0.724 | D | 0.494 | neutral | N | 0.474974033 | None | None | N |
Q/I | 0.3472 | ambiguous | 0.3147 | benign | 0.248 | Stabilizing | 0.776 | D | 0.568 | neutral | None | None | None | None | N |
Q/K | 0.0997 | likely_benign | 0.0953 | benign | -0.283 | Destabilizing | None | N | 0.257 | neutral | N | 0.457444278 | None | None | N |
Q/L | 0.1494 | likely_benign | 0.1359 | benign | 0.248 | Stabilizing | 0.269 | N | 0.514 | neutral | N | 0.499947048 | None | None | N |
Q/M | 0.4034 | ambiguous | 0.3545 | ambiguous | 0.598 | Stabilizing | 0.914 | D | 0.499 | neutral | None | None | None | None | N |
Q/N | 0.3567 | ambiguous | 0.3651 | ambiguous | -0.831 | Destabilizing | 0.269 | N | 0.408 | neutral | None | None | None | None | N |
Q/P | 0.5327 | ambiguous | 0.6342 | pathogenic | -0.013 | Destabilizing | 0.36 | N | 0.529 | neutral | N | 0.481534646 | None | None | N |
Q/R | 0.1046 | likely_benign | 0.0966 | benign | -0.197 | Destabilizing | 0.001 | N | 0.214 | neutral | N | 0.464679681 | None | None | N |
Q/S | 0.2777 | likely_benign | 0.2763 | benign | -0.915 | Destabilizing | 0.336 | N | 0.407 | neutral | None | None | None | None | N |
Q/T | 0.1901 | likely_benign | 0.175 | benign | -0.631 | Destabilizing | 0.045 | N | 0.467 | neutral | None | None | None | None | N |
Q/V | 0.2452 | likely_benign | 0.2236 | benign | -0.013 | Destabilizing | 0.128 | N | 0.518 | neutral | None | None | None | None | N |
Q/W | 0.5178 | ambiguous | 0.4689 | ambiguous | -0.203 | Destabilizing | 0.993 | D | 0.577 | neutral | None | None | None | None | N |
Q/Y | 0.4431 | ambiguous | 0.423 | ambiguous | 0.01 | Stabilizing | 0.937 | D | 0.555 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.