Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8287 | 25084;25085;25086 | chr2:178718147;178718146;178718145 | chr2:179582874;179582873;179582872 |
N2AB | 7970 | 24133;24134;24135 | chr2:178718147;178718146;178718145 | chr2:179582874;179582873;179582872 |
N2A | 7043 | 21352;21353;21354 | chr2:178718147;178718146;178718145 | chr2:179582874;179582873;179582872 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | rs2077779717 | None | 0.95 | N | 0.673 | 0.485 | 0.631562779424 | gnomAD-4.0.0 | 1.60527E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.85909E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7417 | likely_pathogenic | 0.7617 | pathogenic | -2.388 | Highly Destabilizing | 0.95 | D | 0.673 | neutral | N | 0.475502469 | None | None | N |
V/C | 0.9834 | likely_pathogenic | 0.9844 | pathogenic | -1.42 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | N |
V/D | 0.9952 | likely_pathogenic | 0.9971 | pathogenic | -3.109 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
V/E | 0.9853 | likely_pathogenic | 0.9902 | pathogenic | -2.802 | Highly Destabilizing | 0.999 | D | 0.814 | deleterious | D | 0.579032497 | None | None | N |
V/F | 0.7425 | likely_pathogenic | 0.7329 | pathogenic | -1.374 | Destabilizing | 0.988 | D | 0.806 | deleterious | None | None | None | None | N |
V/G | 0.9046 | likely_pathogenic | 0.9227 | pathogenic | -2.973 | Highly Destabilizing | 0.998 | D | 0.837 | deleterious | D | 0.598766493 | None | None | N |
V/H | 0.997 | likely_pathogenic | 0.9979 | pathogenic | -2.767 | Highly Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
V/I | 0.1006 | likely_benign | 0.0972 | benign | -0.679 | Destabilizing | 0.031 | N | 0.201 | neutral | None | None | None | None | N |
V/K | 0.991 | likely_pathogenic | 0.9946 | pathogenic | -1.78 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
V/L | 0.5613 | ambiguous | 0.6207 | pathogenic | -0.679 | Destabilizing | 0.009 | N | 0.305 | neutral | D | 0.537283939 | None | None | N |
V/M | 0.6154 | likely_pathogenic | 0.6547 | pathogenic | -0.719 | Destabilizing | 0.989 | D | 0.733 | prob.delet. | D | 0.578628889 | None | None | N |
V/N | 0.9893 | likely_pathogenic | 0.9932 | pathogenic | -2.396 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
V/P | 0.9906 | likely_pathogenic | 0.9942 | pathogenic | -1.232 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
V/Q | 0.9884 | likely_pathogenic | 0.9926 | pathogenic | -2.071 | Highly Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
V/R | 0.9823 | likely_pathogenic | 0.9891 | pathogenic | -1.84 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
V/S | 0.9564 | likely_pathogenic | 0.965 | pathogenic | -2.917 | Highly Destabilizing | 1.0 | D | 0.819 | deleterious | None | None | None | None | N |
V/T | 0.8005 | likely_pathogenic | 0.8264 | pathogenic | -2.463 | Highly Destabilizing | 0.997 | D | 0.698 | prob.neutral | None | None | None | None | N |
V/W | 0.9943 | likely_pathogenic | 0.9947 | pathogenic | -1.918 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
V/Y | 0.9773 | likely_pathogenic | 0.9781 | pathogenic | -1.602 | Destabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.