Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8288 | 25087;25088;25089 | chr2:178718144;178718143;178718142 | chr2:179582871;179582870;179582869 |
N2AB | 7971 | 24136;24137;24138 | chr2:178718144;178718143;178718142 | chr2:179582871;179582870;179582869 |
N2A | 7044 | 21355;21356;21357 | chr2:178718144;178718143;178718142 | chr2:179582871;179582870;179582869 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | None | N | 0.127 | 0.237 | 0.183819452728 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs372538009 | None | 0.042 | N | 0.264 | 0.172 | None | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
D/N | rs372538009 | None | 0.042 | N | 0.264 | 0.172 | None | gnomAD-4.0.0 | 2.57995E-06 | None | None | None | None | I | None | 3.38432E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.0836 | likely_benign | 0.0767 | benign | 0.013 | Stabilizing | None | N | 0.159 | neutral | N | 0.440301312 | None | None | I |
D/C | 0.6504 | likely_pathogenic | 0.6373 | pathogenic | -0.025 | Destabilizing | 0.393 | N | 0.384 | neutral | None | None | None | None | I |
D/E | 0.1916 | likely_benign | 0.161 | benign | -0.446 | Destabilizing | 0.011 | N | 0.241 | neutral | N | 0.446821852 | None | None | I |
D/F | 0.5562 | ambiguous | 0.5262 | ambiguous | 0.767 | Stabilizing | 0.89 | D | 0.433 | neutral | None | None | None | None | I |
D/G | 0.1491 | likely_benign | 0.1311 | benign | -0.385 | Destabilizing | None | N | 0.127 | neutral | N | 0.462794169 | None | None | I |
D/H | 0.2587 | likely_benign | 0.2624 | benign | 0.573 | Stabilizing | 0.874 | D | 0.295 | neutral | N | 0.48586303 | None | None | I |
D/I | 0.3974 | ambiguous | 0.388 | ambiguous | 1.067 | Stabilizing | 0.362 | N | 0.415 | neutral | None | None | None | None | I |
D/K | 0.3051 | likely_benign | 0.3006 | benign | 0.04 | Stabilizing | 0.318 | N | 0.346 | neutral | None | None | None | None | I |
D/L | 0.3408 | ambiguous | 0.3327 | benign | 1.067 | Stabilizing | 0.19 | N | 0.337 | neutral | None | None | None | None | I |
D/M | 0.5867 | likely_pathogenic | 0.5411 | ambiguous | 1.247 | Stabilizing | 0.751 | D | 0.389 | neutral | None | None | None | None | I |
D/N | 0.108 | likely_benign | 0.1054 | benign | -0.67 | Destabilizing | 0.042 | N | 0.264 | neutral | N | 0.482110649 | None | None | I |
D/P | 0.9561 | likely_pathogenic | 0.9636 | pathogenic | 0.744 | Stabilizing | 0.043 | N | 0.322 | neutral | None | None | None | None | I |
D/Q | 0.2746 | likely_benign | 0.2526 | benign | -0.444 | Destabilizing | 0.462 | N | 0.304 | neutral | None | None | None | None | I |
D/R | 0.2933 | likely_benign | 0.2936 | benign | 0.269 | Stabilizing | 0.531 | D | 0.404 | neutral | None | None | None | None | I |
D/S | 0.0906 | likely_benign | 0.0805 | benign | -0.881 | Destabilizing | 0.005 | N | 0.099 | neutral | None | None | None | None | I |
D/T | 0.2269 | likely_benign | 0.2026 | benign | -0.535 | Destabilizing | None | N | 0.123 | neutral | None | None | None | None | I |
D/V | 0.2242 | likely_benign | 0.2221 | benign | 0.744 | Stabilizing | 0.03 | N | 0.348 | neutral | N | 0.470162859 | None | None | I |
D/W | 0.8757 | likely_pathogenic | 0.8727 | pathogenic | 0.953 | Stabilizing | 0.989 | D | 0.389 | neutral | None | None | None | None | I |
D/Y | 0.2113 | likely_benign | 0.2273 | benign | 1.041 | Stabilizing | 0.859 | D | 0.415 | neutral | N | 0.511990839 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.