Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8290 | 25093;25094;25095 | chr2:178718138;178718137;178718136 | chr2:179582865;179582864;179582863 |
N2AB | 7973 | 24142;24143;24144 | chr2:178718138;178718137;178718136 | chr2:179582865;179582864;179582863 |
N2A | 7046 | 21361;21362;21363 | chr2:178718138;178718137;178718136 | chr2:179582865;179582864;179582863 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/N | None | None | 0.969 | N | 0.464 | 0.274 | 0.521015664611 | gnomAD-4.0.0 | 1.6026E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43303E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1515 | likely_benign | 0.1478 | benign | -0.171 | Destabilizing | 0.004 | N | 0.2 | neutral | N | 0.493423721 | None | None | I |
T/C | 0.7054 | likely_pathogenic | 0.7121 | pathogenic | -0.354 | Destabilizing | 1.0 | D | 0.581 | neutral | None | None | None | None | I |
T/D | 0.5764 | likely_pathogenic | 0.6053 | pathogenic | 0.128 | Stabilizing | 0.976 | D | 0.499 | neutral | None | None | None | None | I |
T/E | 0.4601 | ambiguous | 0.4918 | ambiguous | 0.058 | Stabilizing | 0.975 | D | 0.523 | neutral | None | None | None | None | I |
T/F | 0.2864 | likely_benign | 0.2946 | benign | -0.693 | Destabilizing | 0.999 | D | 0.713 | prob.delet. | None | None | None | None | I |
T/G | 0.5129 | ambiguous | 0.5107 | ambiguous | -0.285 | Destabilizing | 0.98 | D | 0.605 | neutral | None | None | None | None | I |
T/H | 0.3279 | likely_benign | 0.3262 | benign | -0.42 | Destabilizing | 1.0 | D | 0.716 | prob.delet. | None | None | None | None | I |
T/I | 0.2536 | likely_benign | 0.2766 | benign | 0.008 | Stabilizing | 0.993 | D | 0.525 | neutral | N | 0.510433401 | None | None | I |
T/K | 0.2214 | likely_benign | 0.2358 | benign | -0.321 | Destabilizing | 0.982 | D | 0.521 | neutral | None | None | None | None | I |
T/L | 0.1589 | likely_benign | 0.1768 | benign | 0.008 | Stabilizing | 0.982 | D | 0.513 | neutral | None | None | None | None | I |
T/M | 0.1157 | likely_benign | 0.1179 | benign | -0.103 | Destabilizing | 1.0 | D | 0.575 | neutral | None | None | None | None | I |
T/N | 0.1662 | likely_benign | 0.1816 | benign | -0.154 | Destabilizing | 0.969 | D | 0.464 | neutral | N | 0.475107319 | None | None | I |
T/P | 0.4896 | ambiguous | 0.523 | ambiguous | -0.024 | Destabilizing | 0.984 | D | 0.551 | neutral | N | 0.511269457 | None | None | I |
T/Q | 0.292 | likely_benign | 0.3015 | benign | -0.332 | Destabilizing | 0.994 | D | 0.555 | neutral | None | None | None | None | I |
T/R | 0.2105 | likely_benign | 0.216 | benign | -0.015 | Destabilizing | 0.998 | D | 0.559 | neutral | None | None | None | None | I |
T/S | 0.142 | likely_benign | 0.1378 | benign | -0.333 | Destabilizing | 0.037 | N | 0.192 | neutral | N | 0.435607568 | None | None | I |
T/V | 0.2224 | likely_benign | 0.2309 | benign | -0.024 | Destabilizing | 0.951 | D | 0.441 | neutral | None | None | None | None | I |
T/W | 0.7056 | likely_pathogenic | 0.6831 | pathogenic | -0.769 | Destabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
T/Y | 0.3237 | likely_benign | 0.3239 | benign | -0.454 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.