Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8292 | 25099;25100;25101 | chr2:178718132;178718131;178718130 | chr2:179582859;179582858;179582857 |
N2AB | 7975 | 24148;24149;24150 | chr2:178718132;178718131;178718130 | chr2:179582859;179582858;179582857 |
N2A | 7048 | 21367;21368;21369 | chr2:178718132;178718131;178718130 | chr2:179582859;179582858;179582857 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | rs778030351 | 0.355 | 0.995 | N | 0.555 | 0.317 | 0.342865806769 | gnomAD-2.1.1 | 8.13E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 8.9E-06 | 0 |
E/Q | rs778030351 | 0.355 | 0.995 | N | 0.555 | 0.317 | 0.342865806769 | gnomAD-4.0.0 | 4.80143E-06 | None | None | None | None | I | None | 0 | 2.28676E-05 | None | 0 | 0 | None | 0 | 0 | 2.85902E-06 | 1.43291E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.3043 | likely_benign | 0.3084 | benign | -0.18 | Destabilizing | 0.958 | D | 0.625 | neutral | N | 0.495984023 | None | None | I |
E/C | 0.9748 | likely_pathogenic | 0.9757 | pathogenic | -0.303 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
E/D | 0.1633 | likely_benign | 0.1753 | benign | -0.276 | Destabilizing | 0.009 | N | 0.314 | neutral | N | 0.516127222 | None | None | I |
E/F | 0.9391 | likely_pathogenic | 0.9443 | pathogenic | -0.11 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
E/G | 0.4033 | ambiguous | 0.4212 | ambiguous | -0.329 | Destabilizing | 0.993 | D | 0.6 | neutral | N | 0.493774314 | None | None | I |
E/H | 0.7704 | likely_pathogenic | 0.7921 | pathogenic | 0.458 | Stabilizing | 1.0 | D | 0.584 | neutral | None | None | None | None | I |
E/I | 0.712 | likely_pathogenic | 0.7096 | pathogenic | 0.165 | Stabilizing | 0.998 | D | 0.693 | prob.neutral | None | None | None | None | I |
E/K | 0.3813 | ambiguous | 0.4025 | ambiguous | 0.254 | Stabilizing | 0.988 | D | 0.608 | neutral | N | 0.446901997 | None | None | I |
E/L | 0.7466 | likely_pathogenic | 0.7405 | pathogenic | 0.165 | Stabilizing | 0.995 | D | 0.694 | prob.neutral | None | None | None | None | I |
E/M | 0.7869 | likely_pathogenic | 0.7851 | pathogenic | -0.055 | Destabilizing | 0.997 | D | 0.683 | prob.neutral | None | None | None | None | I |
E/N | 0.4522 | ambiguous | 0.4941 | ambiguous | -0.008 | Destabilizing | 0.977 | D | 0.587 | neutral | None | None | None | None | I |
E/P | 0.6605 | likely_pathogenic | 0.6332 | pathogenic | 0.068 | Stabilizing | 0.012 | N | 0.473 | neutral | None | None | None | None | I |
E/Q | 0.3015 | likely_benign | 0.314 | benign | 0.015 | Stabilizing | 0.995 | D | 0.555 | neutral | N | 0.495482591 | None | None | I |
E/R | 0.5707 | likely_pathogenic | 0.5941 | pathogenic | 0.572 | Stabilizing | 0.997 | D | 0.609 | neutral | None | None | None | None | I |
E/S | 0.3986 | ambiguous | 0.4082 | ambiguous | -0.177 | Destabilizing | 0.968 | D | 0.607 | neutral | None | None | None | None | I |
E/T | 0.5264 | ambiguous | 0.5352 | ambiguous | -0.051 | Destabilizing | 0.997 | D | 0.57 | neutral | None | None | None | None | I |
E/V | 0.4827 | ambiguous | 0.4729 | ambiguous | 0.068 | Stabilizing | 0.99 | D | 0.634 | neutral | N | 0.507990528 | None | None | I |
E/W | 0.9824 | likely_pathogenic | 0.9829 | pathogenic | -0.012 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | I |
E/Y | 0.8818 | likely_pathogenic | 0.8906 | pathogenic | 0.119 | Stabilizing | 1.0 | D | 0.671 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.