Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8299 | 25120;25121;25122 | chr2:178718111;178718110;178718109 | chr2:179582838;179582837;179582836 |
N2AB | 7982 | 24169;24170;24171 | chr2:178718111;178718110;178718109 | chr2:179582838;179582837;179582836 |
N2A | 7055 | 21388;21389;21390 | chr2:178718111;178718110;178718109 | chr2:179582838;179582837;179582836 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs2077774413 | None | 0.998 | D | 0.482 | 0.688 | 0.660424939923 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/E | rs2077774413 | None | 0.998 | D | 0.482 | 0.688 | 0.660424939923 | gnomAD-4.0.0 | 6.57255E-06 | None | None | None | None | N | None | 0 | 6.54536E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
K/R | None | None | 0.726 | N | 0.33 | 0.292 | 0.293502639404 | gnomAD-4.0.0 | 1.36967E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79905E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.9556 | likely_pathogenic | 0.9848 | pathogenic | -1.059 | Destabilizing | 1.0 | D | 0.565 | neutral | None | None | None | None | N |
K/C | 0.9706 | likely_pathogenic | 0.9784 | pathogenic | -1.116 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
K/D | 0.9858 | likely_pathogenic | 0.9956 | pathogenic | -0.407 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
K/E | 0.8362 | likely_pathogenic | 0.9436 | pathogenic | -0.233 | Destabilizing | 0.998 | D | 0.482 | neutral | D | 0.635752111 | None | None | N |
K/F | 0.98 | likely_pathogenic | 0.9848 | pathogenic | -0.706 | Destabilizing | 1.0 | D | 0.842 | deleterious | None | None | None | None | N |
K/G | 0.9624 | likely_pathogenic | 0.988 | pathogenic | -1.471 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
K/H | 0.6403 | likely_pathogenic | 0.7266 | pathogenic | -1.768 | Destabilizing | 1.0 | D | 0.791 | deleterious | None | None | None | None | N |
K/I | 0.9326 | likely_pathogenic | 0.9687 | pathogenic | 0.044 | Stabilizing | 0.999 | D | 0.859 | deleterious | D | 0.539882142 | None | None | N |
K/L | 0.8804 | likely_pathogenic | 0.935 | pathogenic | 0.044 | Stabilizing | 0.998 | D | 0.737 | prob.delet. | None | None | None | None | N |
K/M | 0.8289 | likely_pathogenic | 0.9012 | pathogenic | -0.058 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
K/N | 0.951 | likely_pathogenic | 0.9808 | pathogenic | -0.867 | Destabilizing | 1.0 | D | 0.703 | prob.neutral | D | 0.598575407 | None | None | N |
K/P | 0.9951 | likely_pathogenic | 0.9986 | pathogenic | -0.296 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
K/Q | 0.4908 | ambiguous | 0.6686 | pathogenic | -0.853 | Destabilizing | 0.999 | D | 0.692 | prob.neutral | D | 0.531501577 | None | None | N |
K/R | 0.0978 | likely_benign | 0.1185 | benign | -0.761 | Destabilizing | 0.726 | D | 0.33 | neutral | N | 0.513036562 | None | None | N |
K/S | 0.9595 | likely_pathogenic | 0.9865 | pathogenic | -1.645 | Destabilizing | 1.0 | D | 0.547 | neutral | None | None | None | None | N |
K/T | 0.911 | likely_pathogenic | 0.9694 | pathogenic | -1.23 | Destabilizing | 1.0 | D | 0.748 | deleterious | D | 0.534464092 | None | None | N |
K/V | 0.9153 | likely_pathogenic | 0.9584 | pathogenic | -0.296 | Destabilizing | 0.999 | D | 0.808 | deleterious | None | None | None | None | N |
K/W | 0.9561 | likely_pathogenic | 0.9679 | pathogenic | -0.54 | Destabilizing | 1.0 | D | 0.84 | deleterious | None | None | None | None | N |
K/Y | 0.9288 | likely_pathogenic | 0.9426 | pathogenic | -0.223 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.