Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8305 | 25138;25139;25140 | chr2:178718093;178718092;178718091 | chr2:179582820;179582819;179582818 |
N2AB | 7988 | 24187;24188;24189 | chr2:178718093;178718092;178718091 | chr2:179582820;179582819;179582818 |
N2A | 7061 | 21406;21407;21408 | chr2:178718093;178718092;178718091 | chr2:179582820;179582819;179582818 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/Q | rs759985618 | 0.091 | 0.948 | N | 0.335 | 0.267 | 0.247322355667 | gnomAD-2.1.1 | 5.23E-05 | None | None | None | None | N | None | 0 | 2.89788E-04 | None | 0 | 5.57E-05 | None | 0 | None | 0 | 1.78E-05 | 0 |
R/Q | rs759985618 | 0.091 | 0.948 | N | 0.335 | 0.267 | 0.247322355667 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
R/Q | rs759985618 | 0.091 | 0.948 | N | 0.335 | 0.267 | 0.247322355667 | gnomAD-4.0.0 | 3.34745E-05 | None | None | None | None | N | None | 0 | 2.33403E-04 | None | 0 | 2.22846E-05 | None | 0 | 0 | 3.05163E-05 | 0 | 4.80369E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8794 | likely_pathogenic | 0.8964 | pathogenic | 0.146 | Stabilizing | 0.342 | N | 0.291 | neutral | None | None | None | None | N |
R/C | 0.6808 | likely_pathogenic | 0.6908 | pathogenic | -0.149 | Destabilizing | 0.998 | D | 0.307 | neutral | None | None | None | None | N |
R/D | 0.9527 | likely_pathogenic | 0.9622 | pathogenic | -0.256 | Destabilizing | 0.852 | D | 0.387 | neutral | None | None | None | None | N |
R/E | 0.849 | likely_pathogenic | 0.8582 | pathogenic | -0.206 | Destabilizing | 0.417 | N | 0.275 | neutral | None | None | None | None | N |
R/F | 0.8813 | likely_pathogenic | 0.9003 | pathogenic | -0.162 | Destabilizing | 0.942 | D | 0.338 | neutral | None | None | None | None | N |
R/G | 0.7932 | likely_pathogenic | 0.8305 | pathogenic | -0.005 | Destabilizing | 0.917 | D | 0.361 | neutral | N | 0.514204425 | None | None | N |
R/H | 0.3635 | ambiguous | 0.3718 | ambiguous | -0.574 | Destabilizing | 0.981 | D | 0.369 | neutral | None | None | None | None | N |
R/I | 0.7133 | likely_pathogenic | 0.7548 | pathogenic | 0.498 | Stabilizing | 0.031 | N | 0.246 | neutral | None | None | None | None | N |
R/K | 0.3737 | ambiguous | 0.3298 | benign | -0.03 | Destabilizing | 0.004 | N | 0.173 | neutral | None | None | None | None | N |
R/L | 0.6481 | likely_pathogenic | 0.7016 | pathogenic | 0.498 | Stabilizing | 0.487 | N | 0.329 | neutral | N | 0.506662377 | None | None | N |
R/M | 0.8092 | likely_pathogenic | 0.8154 | pathogenic | -0.018 | Destabilizing | 0.945 | D | 0.354 | neutral | None | None | None | None | N |
R/N | 0.933 | likely_pathogenic | 0.9452 | pathogenic | 0.042 | Stabilizing | 0.852 | D | 0.27 | neutral | None | None | None | None | N |
R/P | 0.8188 | likely_pathogenic | 0.8773 | pathogenic | 0.399 | Stabilizing | 0.987 | D | 0.348 | neutral | N | 0.464469038 | None | None | N |
R/Q | 0.3994 | ambiguous | 0.383 | ambiguous | 0.025 | Stabilizing | 0.948 | D | 0.335 | neutral | N | 0.494405156 | None | None | N |
R/S | 0.9143 | likely_pathogenic | 0.9274 | pathogenic | -0.112 | Destabilizing | 0.184 | N | 0.185 | neutral | None | None | None | None | N |
R/T | 0.8308 | likely_pathogenic | 0.8419 | pathogenic | 0.05 | Stabilizing | 0.544 | D | 0.349 | neutral | None | None | None | None | N |
R/V | 0.7952 | likely_pathogenic | 0.8286 | pathogenic | 0.399 | Stabilizing | 0.023 | N | 0.229 | neutral | None | None | None | None | N |
R/W | 0.49 | ambiguous | 0.4954 | ambiguous | -0.363 | Destabilizing | 0.999 | D | 0.335 | neutral | None | None | None | None | N |
R/Y | 0.76 | likely_pathogenic | 0.7823 | pathogenic | 0.059 | Stabilizing | 0.98 | D | 0.325 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.