Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8308 | 25147;25148;25149 | chr2:178718084;178718083;178718082 | chr2:179582811;179582810;179582809 |
N2AB | 7991 | 24196;24197;24198 | chr2:178718084;178718083;178718082 | chr2:179582811;179582810;179582809 |
N2A | 7064 | 21415;21416;21417 | chr2:178718084;178718083;178718082 | chr2:179582811;179582810;179582809 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs373770383 | 0.067 | 0.116 | N | 0.319 | 0.177 | None | gnomAD-2.1.1 | 4.64E-05 | None | None | None | None | N | None | 5.37279E-04 | 0 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/S | rs373770383 | 0.067 | 0.116 | N | 0.319 | 0.177 | None | gnomAD-3.1.2 | 1.38053E-04 | None | None | None | None | N | None | 4.82695E-04 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 4.78927E-04 |
P/S | rs373770383 | 0.067 | 0.116 | N | 0.319 | 0.177 | None | gnomAD-4.0.0 | 2.23131E-05 | None | None | None | None | N | None | 4.53999E-04 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.20277E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1064 | likely_benign | 0.1518 | benign | -0.303 | Destabilizing | 0.001 | N | 0.15 | neutral | N | 0.470218787 | None | None | N |
P/C | 0.8284 | likely_pathogenic | 0.9014 | pathogenic | -0.733 | Destabilizing | 0.952 | D | 0.303 | neutral | None | None | None | None | N |
P/D | 0.5796 | likely_pathogenic | 0.7009 | pathogenic | -0.3 | Destabilizing | None | N | 0.157 | neutral | None | None | None | None | N |
P/E | 0.4419 | ambiguous | 0.5486 | ambiguous | -0.415 | Destabilizing | 0.019 | N | 0.349 | neutral | None | None | None | None | N |
P/F | 0.6941 | likely_pathogenic | 0.8146 | pathogenic | -0.674 | Destabilizing | 0.985 | D | 0.319 | neutral | None | None | None | None | N |
P/G | 0.3978 | ambiguous | 0.531 | ambiguous | -0.368 | Destabilizing | 0.2 | N | 0.305 | neutral | None | None | None | None | N |
P/H | 0.3435 | ambiguous | 0.4725 | ambiguous | 0.026 | Stabilizing | 0.858 | D | 0.299 | neutral | N | 0.484033715 | None | None | N |
P/I | 0.4598 | ambiguous | 0.6221 | pathogenic | -0.273 | Destabilizing | 0.955 | D | 0.358 | neutral | None | None | None | None | N |
P/K | 0.4856 | ambiguous | 0.6078 | pathogenic | -0.344 | Destabilizing | 0.383 | N | 0.327 | neutral | None | None | None | None | N |
P/L | 0.189 | likely_benign | 0.2749 | benign | -0.273 | Destabilizing | 0.694 | D | 0.363 | neutral | D | 0.532576755 | None | None | N |
P/M | 0.4355 | ambiguous | 0.5782 | pathogenic | -0.528 | Destabilizing | 0.889 | D | 0.297 | neutral | None | None | None | None | N |
P/N | 0.4214 | ambiguous | 0.5695 | pathogenic | -0.137 | Destabilizing | 0.272 | N | 0.373 | neutral | None | None | None | None | N |
P/Q | 0.2354 | likely_benign | 0.3359 | benign | -0.344 | Destabilizing | 0.015 | N | 0.201 | neutral | None | None | None | None | N |
P/R | 0.3635 | ambiguous | 0.4691 | ambiguous | 0.094 | Stabilizing | 0.03 | N | 0.246 | neutral | N | 0.500848338 | None | None | N |
P/S | 0.1619 | likely_benign | 0.242 | benign | -0.445 | Destabilizing | 0.116 | N | 0.319 | neutral | N | 0.476798043 | None | None | N |
P/T | 0.1444 | likely_benign | 0.2198 | benign | -0.466 | Destabilizing | 0.22 | N | 0.319 | neutral | N | 0.495693235 | None | None | N |
P/V | 0.3075 | likely_benign | 0.4299 | ambiguous | -0.254 | Destabilizing | 0.345 | N | 0.329 | neutral | None | None | None | None | N |
P/W | 0.8244 | likely_pathogenic | 0.899 | pathogenic | -0.742 | Destabilizing | 0.996 | D | 0.37 | neutral | None | None | None | None | N |
P/Y | 0.6631 | likely_pathogenic | 0.7829 | pathogenic | -0.458 | Destabilizing | 0.985 | D | 0.321 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.