Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8327 | 25204;25205;25206 | chr2:178718027;178718026;178718025 | chr2:179582754;179582753;179582752 |
N2AB | 8010 | 24253;24254;24255 | chr2:178718027;178718026;178718025 | chr2:179582754;179582753;179582752 |
N2A | 7083 | 21472;21473;21474 | chr2:178718027;178718026;178718025 | chr2:179582754;179582753;179582752 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/V | None | None | 0.97 | N | 0.437 | 0.41 | 0.647137792213 | gnomAD-4.0.0 | 1.5914E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.77285E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.2362 | likely_benign | 0.2879 | benign | -0.423 | Destabilizing | 0.879 | D | 0.396 | neutral | N | 0.500349693 | None | None | I |
D/C | 0.7647 | likely_pathogenic | 0.8382 | pathogenic | -0.183 | Destabilizing | 0.996 | D | 0.509 | neutral | None | None | None | None | I |
D/E | 0.2121 | likely_benign | 0.2261 | benign | -0.609 | Destabilizing | 0.001 | N | 0.164 | neutral | N | 0.454441258 | None | None | I |
D/F | 0.6673 | likely_pathogenic | 0.7318 | pathogenic | -0.079 | Destabilizing | 0.996 | D | 0.446 | neutral | None | None | None | None | I |
D/G | 0.2393 | likely_benign | 0.2782 | benign | -0.745 | Destabilizing | 0.016 | N | 0.223 | neutral | N | 0.501216485 | None | None | I |
D/H | 0.376 | ambiguous | 0.4439 | ambiguous | -0.308 | Destabilizing | 0.066 | N | 0.291 | neutral | N | 0.511529479 | None | None | I |
D/I | 0.4999 | ambiguous | 0.592 | pathogenic | 0.414 | Stabilizing | 0.996 | D | 0.456 | neutral | None | None | None | None | I |
D/K | 0.5395 | ambiguous | 0.6083 | pathogenic | -0.394 | Destabilizing | 0.945 | D | 0.31 | neutral | None | None | None | None | I |
D/L | 0.4618 | ambiguous | 0.5343 | ambiguous | 0.414 | Stabilizing | 0.992 | D | 0.435 | neutral | None | None | None | None | I |
D/M | 0.7051 | likely_pathogenic | 0.7599 | pathogenic | 0.747 | Stabilizing | 0.999 | D | 0.443 | neutral | None | None | None | None | I |
D/N | 0.1276 | likely_benign | 0.142 | benign | -0.767 | Destabilizing | 0.764 | D | 0.361 | neutral | N | 0.497386746 | None | None | I |
D/P | 0.9194 | likely_pathogenic | 0.9475 | pathogenic | 0.16 | Stabilizing | 0.829 | D | 0.338 | neutral | None | None | None | None | I |
D/Q | 0.4207 | ambiguous | 0.474 | ambiguous | -0.617 | Destabilizing | 0.958 | D | 0.351 | neutral | None | None | None | None | I |
D/R | 0.5304 | ambiguous | 0.6025 | pathogenic | -0.171 | Destabilizing | 0.992 | D | 0.412 | neutral | None | None | None | None | I |
D/S | 0.1443 | likely_benign | 0.1655 | benign | -0.958 | Destabilizing | 0.906 | D | 0.317 | neutral | None | None | None | None | I |
D/T | 0.3226 | likely_benign | 0.3585 | ambiguous | -0.703 | Destabilizing | 0.811 | D | 0.339 | neutral | None | None | None | None | I |
D/V | 0.3324 | likely_benign | 0.4058 | ambiguous | 0.16 | Stabilizing | 0.97 | D | 0.437 | neutral | N | 0.499677689 | None | None | I |
D/W | 0.9337 | likely_pathogenic | 0.952 | pathogenic | 0.058 | Stabilizing | 1.0 | D | 0.563 | neutral | None | None | None | None | I |
D/Y | 0.3589 | ambiguous | 0.4381 | ambiguous | 0.126 | Stabilizing | 0.989 | D | 0.457 | neutral | N | 0.518436808 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.