Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8328 | 25207;25208;25209 | chr2:178718024;178718023;178718022 | chr2:179582751;179582750;179582749 |
N2AB | 8011 | 24256;24257;24258 | chr2:178718024;178718023;178718022 | chr2:179582751;179582750;179582749 |
N2A | 7084 | 21475;21476;21477 | chr2:178718024;178718023;178718022 | chr2:179582751;179582750;179582749 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/N | rs767212475 | 0.233 | None | N | 0.143 | 0.188 | 0.190952846119 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.1275 | likely_benign | 0.1387 | benign | 0.445 | Stabilizing | 0.001 | N | 0.143 | neutral | None | None | None | None | I |
H/C | 0.1869 | likely_benign | 0.2249 | benign | 0.67 | Stabilizing | 0.76 | D | 0.244 | neutral | None | None | None | None | I |
H/D | 0.0994 | likely_benign | 0.0997 | benign | -0.192 | Destabilizing | None | N | 0.149 | neutral | N | 0.444653913 | None | None | I |
H/E | 0.1529 | likely_benign | 0.1593 | benign | -0.161 | Destabilizing | 0.008 | N | 0.164 | neutral | None | None | None | None | I |
H/F | 0.2286 | likely_benign | 0.2494 | benign | 1.137 | Stabilizing | 0.355 | N | 0.319 | neutral | None | None | None | None | I |
H/G | 0.1725 | likely_benign | 0.191 | benign | 0.175 | Stabilizing | 0.042 | N | 0.259 | neutral | None | None | None | None | I |
H/I | 0.1673 | likely_benign | 0.1685 | benign | 1.133 | Stabilizing | 0.001 | N | 0.197 | neutral | None | None | None | None | I |
H/K | 0.168 | likely_benign | 0.1806 | benign | 0.402 | Stabilizing | None | N | 0.138 | neutral | None | None | None | None | I |
H/L | 0.0834 | likely_benign | 0.0922 | benign | 1.133 | Stabilizing | 0.013 | N | 0.289 | neutral | N | 0.370308083 | None | None | I |
H/M | 0.2912 | likely_benign | 0.3007 | benign | 0.743 | Stabilizing | 0.58 | D | 0.302 | neutral | None | None | None | None | I |
H/N | 0.0622 | likely_benign | 0.0584 | benign | 0.236 | Stabilizing | None | N | 0.143 | neutral | N | 0.453716113 | None | None | I |
H/P | 0.0839 | likely_benign | 0.0999 | benign | 0.928 | Stabilizing | None | N | 0.149 | neutral | N | 0.387296333 | None | None | I |
H/Q | 0.1089 | likely_benign | 0.1216 | benign | 0.353 | Stabilizing | 0.002 | N | 0.131 | neutral | N | 0.421950411 | None | None | I |
H/R | 0.0856 | likely_benign | 0.0965 | benign | -0.2 | Destabilizing | 0.029 | N | 0.17 | neutral | N | 0.384546816 | None | None | I |
H/S | 0.1071 | likely_benign | 0.1082 | benign | 0.382 | Stabilizing | 0.019 | N | 0.235 | neutral | None | None | None | None | I |
H/T | 0.1385 | likely_benign | 0.1365 | benign | 0.519 | Stabilizing | None | N | 0.141 | neutral | None | None | None | None | I |
H/V | 0.1395 | likely_benign | 0.1439 | benign | 0.928 | Stabilizing | 0.018 | N | 0.286 | neutral | None | None | None | None | I |
H/W | 0.3852 | ambiguous | 0.4089 | ambiguous | 1.084 | Stabilizing | 0.983 | D | 0.221 | neutral | None | None | None | None | I |
H/Y | 0.0863 | likely_benign | 0.0931 | benign | 1.333 | Stabilizing | 0.293 | N | 0.269 | neutral | N | 0.451118525 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.