Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8329 | 25210;25211;25212 | chr2:178718021;178718020;178718019 | chr2:179582748;179582747;179582746 |
N2AB | 8012 | 24259;24260;24261 | chr2:178718021;178718020;178718019 | chr2:179582748;179582747;179582746 |
N2A | 7085 | 21478;21479;21480 | chr2:178718021;178718020;178718019 | chr2:179582748;179582747;179582746 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/G | None | None | 0.008 | N | 0.089 | 0.191 | 0.15556083564 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
S/N | None | None | 0.001 | N | 0.151 | 0.212 | 0.165133752707 | gnomAD-4.0.0 | 4.78965E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 6.29665E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0862 | likely_benign | 0.0946 | benign | -0.182 | Destabilizing | None | N | 0.082 | neutral | None | None | None | None | I |
S/C | 0.169 | likely_benign | 0.2089 | benign | -0.177 | Destabilizing | 0.988 | D | 0.343 | neutral | D | 0.532129779 | None | None | I |
S/D | 0.3141 | likely_benign | 0.3587 | ambiguous | -0.008 | Destabilizing | 0.673 | D | 0.184 | neutral | None | None | None | None | I |
S/E | 0.491 | ambiguous | 0.5446 | ambiguous | -0.109 | Destabilizing | 0.703 | D | 0.175 | neutral | None | None | None | None | I |
S/F | 0.2552 | likely_benign | 0.2784 | benign | -0.838 | Destabilizing | 0.991 | D | 0.362 | neutral | None | None | None | None | I |
S/G | 0.0824 | likely_benign | 0.0947 | benign | -0.272 | Destabilizing | 0.008 | N | 0.089 | neutral | N | 0.493949369 | None | None | I |
S/H | 0.3177 | likely_benign | 0.364 | ambiguous | -0.698 | Destabilizing | 0.991 | D | 0.345 | neutral | None | None | None | None | I |
S/I | 0.1832 | likely_benign | 0.2173 | benign | -0.078 | Destabilizing | 0.976 | D | 0.392 | neutral | N | 0.513772035 | None | None | I |
S/K | 0.5766 | likely_pathogenic | 0.6405 | pathogenic | -0.425 | Destabilizing | 0.08 | N | 0.091 | neutral | None | None | None | None | I |
S/L | 0.1192 | likely_benign | 0.1268 | benign | -0.078 | Destabilizing | 0.939 | D | 0.338 | neutral | None | None | None | None | I |
S/M | 0.2246 | likely_benign | 0.2351 | benign | 0.079 | Stabilizing | 0.997 | D | 0.345 | neutral | None | None | None | None | I |
S/N | 0.1013 | likely_benign | 0.1155 | benign | -0.122 | Destabilizing | 0.001 | N | 0.151 | neutral | N | 0.495200163 | None | None | I |
S/P | 0.3852 | ambiguous | 0.4666 | ambiguous | -0.085 | Destabilizing | 0.893 | D | 0.387 | neutral | None | None | None | None | I |
S/Q | 0.4515 | ambiguous | 0.5132 | ambiguous | -0.367 | Destabilizing | 0.939 | D | 0.32 | neutral | None | None | None | None | I |
S/R | 0.4545 | ambiguous | 0.5323 | ambiguous | -0.164 | Destabilizing | 0.853 | D | 0.319 | neutral | N | 0.520423895 | None | None | I |
S/T | 0.0889 | likely_benign | 0.093 | benign | -0.207 | Destabilizing | 0.13 | N | 0.228 | neutral | N | 0.497624393 | None | None | I |
S/V | 0.2047 | likely_benign | 0.2361 | benign | -0.085 | Destabilizing | 0.742 | D | 0.334 | neutral | None | None | None | None | I |
S/W | 0.3821 | ambiguous | 0.4258 | ambiguous | -0.909 | Destabilizing | 0.999 | D | 0.423 | neutral | None | None | None | None | I |
S/Y | 0.2446 | likely_benign | 0.2703 | benign | -0.604 | Destabilizing | 0.997 | D | 0.363 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.