Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8330 | 25213;25214;25215 | chr2:178718018;178718017;178718016 | chr2:179582745;179582744;179582743 |
N2AB | 8013 | 24262;24263;24264 | chr2:178718018;178718017;178718016 | chr2:179582745;179582744;179582743 |
N2A | 7086 | 21481;21482;21483 | chr2:178718018;178718017;178718016 | chr2:179582745;179582744;179582743 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/H | None | None | 1.0 | D | 0.845 | 0.644 | 0.661693444866 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.8285 | likely_pathogenic | 0.9014 | pathogenic | 0.388 | Stabilizing | 1.0 | D | 0.847 | deleterious | D | 0.633425081 | None | None | N |
D/C | 0.9628 | likely_pathogenic | 0.9826 | pathogenic | 0.303 | Stabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
D/E | 0.7922 | likely_pathogenic | 0.8603 | pathogenic | -0.475 | Destabilizing | 0.965 | D | 0.625 | neutral | D | 0.606676143 | None | None | N |
D/F | 0.9709 | likely_pathogenic | 0.9846 | pathogenic | 1.142 | Stabilizing | 1.0 | D | 0.887 | deleterious | None | None | None | None | N |
D/G | 0.9104 | likely_pathogenic | 0.9583 | pathogenic | -0.06 | Destabilizing | 0.996 | D | 0.736 | prob.delet. | D | 0.665665607 | None | None | N |
D/H | 0.8203 | likely_pathogenic | 0.8728 | pathogenic | 0.841 | Stabilizing | 1.0 | D | 0.845 | deleterious | D | 0.591342558 | None | None | N |
D/I | 0.9564 | likely_pathogenic | 0.9793 | pathogenic | 1.589 | Stabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
D/K | 0.9736 | likely_pathogenic | 0.983 | pathogenic | 0.385 | Stabilizing | 1.0 | D | 0.832 | deleterious | None | None | None | None | N |
D/L | 0.9492 | likely_pathogenic | 0.9724 | pathogenic | 1.589 | Stabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | N |
D/M | 0.974 | likely_pathogenic | 0.9854 | pathogenic | 1.867 | Stabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | N |
D/N | 0.5535 | ambiguous | 0.6929 | pathogenic | -0.505 | Destabilizing | 0.668 | D | 0.373 | neutral | D | 0.608362017 | None | None | N |
D/P | 0.9959 | likely_pathogenic | 0.9974 | pathogenic | 1.219 | Stabilizing | 0.999 | D | 0.843 | deleterious | None | None | None | None | N |
D/Q | 0.9423 | likely_pathogenic | 0.9611 | pathogenic | -0.173 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
D/R | 0.9762 | likely_pathogenic | 0.9846 | pathogenic | 0.425 | Stabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | N |
D/S | 0.6961 | likely_pathogenic | 0.8119 | pathogenic | -0.727 | Destabilizing | 0.998 | D | 0.655 | neutral | None | None | None | None | N |
D/T | 0.9181 | likely_pathogenic | 0.9579 | pathogenic | -0.307 | Destabilizing | 0.999 | D | 0.83 | deleterious | None | None | None | None | N |
D/V | 0.8878 | likely_pathogenic | 0.943 | pathogenic | 1.219 | Stabilizing | 1.0 | D | 0.882 | deleterious | D | 0.666069215 | None | None | N |
D/W | 0.9949 | likely_pathogenic | 0.9971 | pathogenic | 1.255 | Stabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | N |
D/Y | 0.8636 | likely_pathogenic | 0.9205 | pathogenic | 1.435 | Stabilizing | 1.0 | D | 0.889 | deleterious | D | 0.64984805 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.