Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8333 | 25222;25223;25224 | chr2:178718009;178718008;178718007 | chr2:179582736;179582735;179582734 |
N2AB | 8016 | 24271;24272;24273 | chr2:178718009;178718008;178718007 | chr2:179582736;179582735;179582734 |
N2A | 7089 | 21490;21491;21492 | chr2:178718009;178718008;178718007 | chr2:179582736;179582735;179582734 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1438182051 | -0.651 | 0.797 | N | 0.519 | 0.316 | 0.233785782151 | gnomAD-2.1.1 | 3.18E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.48E-05 | 0 |
E/D | rs1438182051 | -0.651 | 0.797 | N | 0.519 | 0.316 | 0.233785782151 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/D | rs1438182051 | -0.651 | 0.797 | N | 0.519 | 0.316 | 0.233785782151 | gnomAD-4.0.0 | 2.56224E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.78675E-06 | 0 | 0 |
E/G | rs770811407 | -1.337 | 0.99 | N | 0.627 | 0.515 | 0.556183318313 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
E/G | rs770811407 | -1.337 | 0.99 | N | 0.627 | 0.515 | 0.556183318313 | gnomAD-4.0.0 | 7.95689E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 3.76464E-05 | 0 | 2.85873E-06 | 0 | 6.04778E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1507 | likely_benign | 0.1919 | benign | -0.881 | Destabilizing | 0.861 | D | 0.544 | neutral | N | 0.506507661 | None | None | I |
E/C | 0.8343 | likely_pathogenic | 0.8943 | pathogenic | -0.437 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | None | None | None | None | I |
E/D | 0.1884 | likely_benign | 0.2281 | benign | -1.194 | Destabilizing | 0.797 | D | 0.519 | neutral | N | 0.502005918 | None | None | I |
E/F | 0.6308 | likely_pathogenic | 0.7082 | pathogenic | -0.466 | Destabilizing | 0.992 | D | 0.717 | prob.delet. | None | None | None | None | I |
E/G | 0.241 | likely_benign | 0.3315 | benign | -1.249 | Destabilizing | 0.99 | D | 0.627 | neutral | N | 0.500989562 | None | None | I |
E/H | 0.4109 | ambiguous | 0.5127 | ambiguous | -0.835 | Destabilizing | 1.0 | D | 0.605 | neutral | None | None | None | None | I |
E/I | 0.2245 | likely_benign | 0.2708 | benign | 0.123 | Stabilizing | 0.896 | D | 0.609 | neutral | None | None | None | None | I |
E/K | 0.1207 | likely_benign | 0.1497 | benign | -0.639 | Destabilizing | 0.983 | D | 0.519 | neutral | N | 0.486727035 | None | None | I |
E/L | 0.3186 | likely_benign | 0.3831 | ambiguous | 0.123 | Stabilizing | 0.051 | N | 0.426 | neutral | None | None | None | None | I |
E/M | 0.3492 | ambiguous | 0.4099 | ambiguous | 0.658 | Stabilizing | 0.916 | D | 0.707 | prob.neutral | None | None | None | None | I |
E/N | 0.2553 | likely_benign | 0.3152 | benign | -1.091 | Destabilizing | 0.983 | D | 0.591 | neutral | None | None | None | None | I |
E/P | 0.6379 | likely_pathogenic | 0.756 | pathogenic | -0.19 | Destabilizing | 0.982 | D | 0.665 | neutral | None | None | None | None | I |
E/Q | 0.1202 | likely_benign | 0.1485 | benign | -0.948 | Destabilizing | 0.998 | D | 0.58 | neutral | N | 0.496637384 | None | None | I |
E/R | 0.2161 | likely_benign | 0.2751 | benign | -0.453 | Destabilizing | 0.996 | D | 0.598 | neutral | None | None | None | None | I |
E/S | 0.2132 | likely_benign | 0.2674 | benign | -1.414 | Destabilizing | 0.909 | D | 0.511 | neutral | None | None | None | None | I |
E/T | 0.1784 | likely_benign | 0.21 | benign | -1.103 | Destabilizing | 0.27 | N | 0.313 | neutral | None | None | None | None | I |
E/V | 0.1426 | likely_benign | 0.1697 | benign | -0.19 | Destabilizing | 0.111 | N | 0.392 | neutral | N | 0.453790684 | None | None | I |
E/W | 0.85 | likely_pathogenic | 0.9017 | pathogenic | -0.263 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | I |
E/Y | 0.5406 | ambiguous | 0.6373 | pathogenic | -0.223 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.