Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8339 | 25240;25241;25242 | chr2:178717991;178717990;178717989 | chr2:179582718;179582717;179582716 |
N2AB | 8022 | 24289;24290;24291 | chr2:178717991;178717990;178717989 | chr2:179582718;179582717;179582716 |
N2A | 7095 | 21508;21509;21510 | chr2:178717991;178717990;178717989 | chr2:179582718;179582717;179582716 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs1283273345 | -0.57 | None | N | 0.082 | 0.171 | 0.0297737177859 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
D/E | rs1283273345 | -0.57 | None | N | 0.082 | 0.171 | 0.0297737177859 | gnomAD-4.0.0 | 4.77458E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.57716E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1816 | likely_benign | 0.2239 | benign | -0.417 | Destabilizing | None | N | 0.203 | neutral | N | 0.422350269 | None | None | N |
D/C | 0.6969 | likely_pathogenic | 0.8087 | pathogenic | -0.205 | Destabilizing | 0.116 | N | 0.556 | neutral | None | None | None | None | N |
D/E | 0.0517 | likely_benign | 0.0511 | benign | -0.857 | Destabilizing | None | N | 0.082 | neutral | N | 0.358010789 | None | None | N |
D/F | 0.5923 | likely_pathogenic | 0.6927 | pathogenic | -0.661 | Destabilizing | 0.051 | N | 0.479 | neutral | None | None | None | None | N |
D/G | 0.243 | likely_benign | 0.295 | benign | -0.714 | Destabilizing | 0.001 | N | 0.193 | neutral | N | 0.457233634 | None | None | N |
D/H | 0.3013 | likely_benign | 0.3998 | ambiguous | -1.013 | Destabilizing | 0.013 | N | 0.412 | neutral | N | 0.43460749 | None | None | N |
D/I | 0.2948 | likely_benign | 0.377 | ambiguous | 0.346 | Stabilizing | 0.003 | N | 0.434 | neutral | None | None | None | None | N |
D/K | 0.2762 | likely_benign | 0.3694 | ambiguous | -0.348 | Destabilizing | None | N | 0.181 | neutral | None | None | None | None | N |
D/L | 0.3798 | ambiguous | 0.4789 | ambiguous | 0.346 | Stabilizing | 0.001 | N | 0.31 | neutral | None | None | None | None | N |
D/M | 0.4938 | ambiguous | 0.5919 | pathogenic | 0.789 | Stabilizing | 0.116 | N | 0.527 | neutral | None | None | None | None | N |
D/N | 0.1202 | likely_benign | 0.1509 | benign | -0.575 | Destabilizing | 0.001 | N | 0.173 | neutral | N | 0.419542037 | None | None | N |
D/P | 0.9701 | likely_pathogenic | 0.9869 | pathogenic | 0.116 | Stabilizing | 0.003 | N | 0.287 | neutral | None | None | None | None | N |
D/Q | 0.189 | likely_benign | 0.2469 | benign | -0.499 | Destabilizing | None | N | 0.179 | neutral | None | None | None | None | N |
D/R | 0.3727 | ambiguous | 0.4919 | ambiguous | -0.407 | Destabilizing | None | N | 0.201 | neutral | None | None | None | None | N |
D/S | 0.1237 | likely_benign | 0.1548 | benign | -0.867 | Destabilizing | None | N | 0.107 | neutral | None | None | None | None | N |
D/T | 0.1848 | likely_benign | 0.2427 | benign | -0.621 | Destabilizing | 0.001 | N | 0.191 | neutral | None | None | None | None | N |
D/V | 0.1701 | likely_benign | 0.2154 | benign | 0.116 | Stabilizing | 0.001 | N | 0.33 | neutral | N | 0.381293081 | None | None | N |
D/W | 0.8494 | likely_pathogenic | 0.92 | pathogenic | -0.716 | Destabilizing | 0.316 | N | 0.516 | neutral | None | None | None | None | N |
D/Y | 0.2964 | likely_benign | 0.3854 | ambiguous | -0.458 | Destabilizing | 0.039 | N | 0.46 | neutral | N | 0.47195237 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.