Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8340 | 25243;25244;25245 | chr2:178717988;178717987;178717986 | chr2:179582715;179582714;179582713 |
N2AB | 8023 | 24292;24293;24294 | chr2:178717988;178717987;178717986 | chr2:179582715;179582714;179582713 |
N2A | 7096 | 21511;21512;21513 | chr2:178717988;178717987;178717986 | chr2:179582715;179582714;179582713 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | None | None | 1.0 | D | 0.576 | 0.7 | 0.483596354421 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.9945 | likely_pathogenic | 0.9974 | pathogenic | -0.686 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | I |
N/C | 0.9569 | likely_pathogenic | 0.9796 | pathogenic | -0.268 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
N/D | 0.9815 | likely_pathogenic | 0.9879 | pathogenic | -1.678 | Destabilizing | 0.999 | D | 0.611 | neutral | D | 0.64236165 | None | None | I |
N/E | 0.9988 | likely_pathogenic | 0.9994 | pathogenic | -1.577 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | I |
N/F | 0.9988 | likely_pathogenic | 0.9993 | pathogenic | -0.624 | Destabilizing | 1.0 | D | 0.751 | deleterious | None | None | None | None | I |
N/G | 0.9851 | likely_pathogenic | 0.9926 | pathogenic | -0.99 | Destabilizing | 1.0 | D | 0.559 | neutral | None | None | None | None | I |
N/H | 0.973 | likely_pathogenic | 0.9857 | pathogenic | -0.794 | Destabilizing | 1.0 | D | 0.744 | deleterious | D | 0.659390032 | None | None | I |
N/I | 0.9912 | likely_pathogenic | 0.9942 | pathogenic | 0.078 | Stabilizing | 1.0 | D | 0.725 | prob.delet. | D | 0.659591837 | None | None | I |
N/K | 0.9985 | likely_pathogenic | 0.999 | pathogenic | -0.27 | Destabilizing | 1.0 | D | 0.745 | deleterious | D | 0.658986424 | None | None | I |
N/L | 0.9806 | likely_pathogenic | 0.9877 | pathogenic | 0.078 | Stabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
N/M | 0.9941 | likely_pathogenic | 0.9958 | pathogenic | 0.522 | Stabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | I |
N/P | 0.9976 | likely_pathogenic | 0.9986 | pathogenic | -0.148 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | I |
N/Q | 0.9984 | likely_pathogenic | 0.9991 | pathogenic | -1.155 | Destabilizing | 1.0 | D | 0.756 | deleterious | None | None | None | None | I |
N/R | 0.9966 | likely_pathogenic | 0.998 | pathogenic | -0.164 | Destabilizing | 1.0 | D | 0.772 | deleterious | None | None | None | None | I |
N/S | 0.7637 | likely_pathogenic | 0.8449 | pathogenic | -0.932 | Destabilizing | 1.0 | D | 0.576 | neutral | D | 0.584502649 | None | None | I |
N/T | 0.9388 | likely_pathogenic | 0.9591 | pathogenic | -0.672 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | D | 0.657977402 | None | None | I |
N/V | 0.9895 | likely_pathogenic | 0.9937 | pathogenic | -0.148 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | I |
N/W | 0.9997 | likely_pathogenic | 0.9998 | pathogenic | -0.486 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | I |
N/Y | 0.9913 | likely_pathogenic | 0.9945 | pathogenic | -0.159 | Destabilizing | 1.0 | D | 0.747 | deleterious | D | 0.659591837 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.