Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8341 | 25246;25247;25248 | chr2:178717985;178717984;178717983 | chr2:179582712;179582711;179582710 |
N2AB | 8024 | 24295;24296;24297 | chr2:178717985;178717984;178717983 | chr2:179582712;179582711;179582710 |
N2A | 7097 | 21514;21515;21516 | chr2:178717985;178717984;178717983 | chr2:179582712;179582711;179582710 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/R | rs1221926854 | 0.083 | 0.132 | N | 0.379 | 0.306 | 0.0666544352282 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
S/R | rs1221926854 | 0.083 | 0.132 | N | 0.379 | 0.306 | 0.0666544352282 | gnomAD-4.0.0 | 6.84318E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.99638E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.0907 | likely_benign | 0.1015 | benign | -0.236 | Destabilizing | 0.002 | N | 0.341 | neutral | None | None | None | None | I |
S/C | 0.2539 | likely_benign | 0.305 | benign | -0.392 | Destabilizing | 0.001 | N | 0.353 | neutral | N | 0.501993975 | None | None | I |
S/D | 0.3722 | ambiguous | 0.473 | ambiguous | 0.023 | Stabilizing | 0.051 | N | 0.296 | neutral | None | None | None | None | I |
S/E | 0.4775 | ambiguous | 0.6007 | pathogenic | -0.087 | Destabilizing | 0.001 | N | 0.104 | neutral | None | None | None | None | I |
S/F | 0.312 | likely_benign | 0.4093 | ambiguous | -0.949 | Destabilizing | 0.584 | D | 0.411 | neutral | None | None | None | None | I |
S/G | 0.117 | likely_benign | 0.1359 | benign | -0.289 | Destabilizing | 0.13 | N | 0.312 | neutral | N | 0.476784974 | None | None | I |
S/H | 0.3386 | likely_benign | 0.4323 | ambiguous | -0.667 | Destabilizing | 0.897 | D | 0.341 | neutral | None | None | None | None | I |
S/I | 0.1285 | likely_benign | 0.1447 | benign | -0.23 | Destabilizing | 0.002 | N | 0.305 | neutral | D | 0.523634771 | None | None | I |
S/K | 0.5708 | likely_pathogenic | 0.7247 | pathogenic | -0.43 | Destabilizing | 0.005 | N | 0.297 | neutral | None | None | None | None | I |
S/L | 0.1197 | likely_benign | 0.1477 | benign | -0.23 | Destabilizing | 0.028 | N | 0.393 | neutral | None | None | None | None | I |
S/M | 0.2049 | likely_benign | 0.2183 | benign | -0.12 | Destabilizing | 0.076 | N | 0.375 | neutral | None | None | None | None | I |
S/N | 0.1308 | likely_benign | 0.1567 | benign | -0.203 | Destabilizing | 0.019 | N | 0.339 | neutral | D | 0.529040591 | None | None | I |
S/P | 0.3404 | ambiguous | 0.4333 | ambiguous | -0.207 | Destabilizing | 0.699 | D | 0.365 | neutral | None | None | None | None | I |
S/Q | 0.4611 | ambiguous | 0.5694 | pathogenic | -0.452 | Destabilizing | 0.584 | D | 0.309 | neutral | None | None | None | None | I |
S/R | 0.475 | ambiguous | 0.4693 | ambiguous | -0.173 | Destabilizing | 0.132 | N | 0.379 | neutral | N | 0.491348995 | None | None | I |
S/T | 0.0933 | likely_benign | 0.1035 | benign | -0.316 | Destabilizing | 0.009 | N | 0.38 | neutral | N | 0.500315194 | None | None | I |
S/V | 0.1659 | likely_benign | 0.1886 | benign | -0.207 | Destabilizing | 0.011 | N | 0.395 | neutral | None | None | None | None | I |
S/W | 0.4996 | ambiguous | 0.6149 | pathogenic | -1.001 | Destabilizing | 0.97 | D | 0.424 | neutral | None | None | None | None | I |
S/Y | 0.2809 | likely_benign | 0.3696 | ambiguous | -0.699 | Destabilizing | 0.74 | D | 0.399 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.