Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8343 | 25252;25253;25254 | chr2:178717979;178717978;178717977 | chr2:179582706;179582705;179582704 |
N2AB | 8026 | 24301;24302;24303 | chr2:178717979;178717978;178717977 | chr2:179582706;179582705;179582704 |
N2A | 7099 | 21520;21521;21522 | chr2:178717979;178717978;178717977 | chr2:179582706;179582705;179582704 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | rs1288642142 | -0.155 | 1.0 | D | 0.739 | 0.61 | 0.63749958327 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 4.65E-05 | 0 | 0 |
G/A | rs1288642142 | -0.155 | 1.0 | D | 0.739 | 0.61 | 0.63749958327 | gnomAD-4.0.0 | 1.59204E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 1.88246E-05 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.7955 | likely_pathogenic | 0.8948 | pathogenic | -0.479 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | D | 0.62676554 | None | None | I |
G/C | 0.962 | likely_pathogenic | 0.9859 | pathogenic | -0.959 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | I |
G/D | 0.9508 | likely_pathogenic | 0.979 | pathogenic | -0.871 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | I |
G/E | 0.9706 | likely_pathogenic | 0.9891 | pathogenic | -1.044 | Destabilizing | 1.0 | D | 0.825 | deleterious | D | 0.617044985 | None | None | I |
G/F | 0.9908 | likely_pathogenic | 0.9959 | pathogenic | -1.222 | Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | I |
G/H | 0.9886 | likely_pathogenic | 0.9963 | pathogenic | -0.671 | Destabilizing | 1.0 | D | 0.8 | deleterious | None | None | None | None | I |
G/I | 0.9905 | likely_pathogenic | 0.9968 | pathogenic | -0.644 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | I |
G/K | 0.9871 | likely_pathogenic | 0.9953 | pathogenic | -0.968 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
G/L | 0.987 | likely_pathogenic | 0.9951 | pathogenic | -0.644 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
G/M | 0.9923 | likely_pathogenic | 0.9972 | pathogenic | -0.56 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
G/N | 0.9729 | likely_pathogenic | 0.9884 | pathogenic | -0.619 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
G/P | 0.9988 | likely_pathogenic | 0.9995 | pathogenic | -0.557 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | I |
G/Q | 0.9766 | likely_pathogenic | 0.9916 | pathogenic | -0.959 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | I |
G/R | 0.9664 | likely_pathogenic | 0.987 | pathogenic | -0.438 | Destabilizing | 1.0 | D | 0.854 | deleterious | D | 0.617448593 | None | None | I |
G/S | 0.7672 | likely_pathogenic | 0.8899 | pathogenic | -0.733 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
G/T | 0.9466 | likely_pathogenic | 0.9805 | pathogenic | -0.846 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | I |
G/V | 0.9768 | likely_pathogenic | 0.9918 | pathogenic | -0.557 | Destabilizing | 1.0 | D | 0.823 | deleterious | D | 0.643793922 | None | None | I |
G/W | 0.9877 | likely_pathogenic | 0.9951 | pathogenic | -1.332 | Destabilizing | 1.0 | D | 0.804 | deleterious | D | 0.643995726 | None | None | I |
G/Y | 0.9871 | likely_pathogenic | 0.9951 | pathogenic | -1.015 | Destabilizing | 1.0 | D | 0.828 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.