Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8344 | 25255;25256;25257 | chr2:178717976;178717975;178717974 | chr2:179582703;179582702;179582701 |
N2AB | 8027 | 24304;24305;24306 | chr2:178717976;178717975;178717974 | chr2:179582703;179582702;179582701 |
N2A | 7100 | 21523;21524;21525 | chr2:178717976;178717975;178717974 | chr2:179582703;179582702;179582701 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/E | rs748045267 | -1.103 | 0.747 | N | 0.427 | 0.187 | 0.489243007833 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
A/E | rs748045267 | -1.103 | 0.747 | N | 0.427 | 0.187 | 0.489243007833 | gnomAD-4.0.0 | 1.59253E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86182E-06 | 0 | 0 |
A/T | rs2077751372 | None | 0.004 | N | 0.247 | 0.096 | 0.171388866994 | gnomAD-4.0.0 | 1.36876E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79943E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.4912 | ambiguous | 0.5139 | ambiguous | -0.751 | Destabilizing | 0.996 | D | 0.484 | neutral | None | None | None | None | I |
A/D | 0.2326 | likely_benign | 0.2836 | benign | -1.013 | Destabilizing | 0.736 | D | 0.551 | neutral | None | None | None | None | I |
A/E | 0.1777 | likely_benign | 0.2022 | benign | -1.169 | Destabilizing | 0.747 | D | 0.427 | neutral | N | 0.404012438 | None | None | I |
A/F | 0.2536 | likely_benign | 0.2713 | benign | -1.138 | Destabilizing | 0.07 | N | 0.452 | neutral | None | None | None | None | I |
A/G | 0.1508 | likely_benign | 0.1693 | benign | -0.631 | Destabilizing | 0.041 | N | 0.344 | neutral | D | 0.524824063 | None | None | I |
A/H | 0.3831 | ambiguous | 0.4211 | ambiguous | -0.684 | Destabilizing | 0.999 | D | 0.589 | neutral | None | None | None | None | I |
A/I | 0.2216 | likely_benign | 0.2488 | benign | -0.55 | Destabilizing | 0.948 | D | 0.465 | neutral | None | None | None | None | I |
A/K | 0.3993 | ambiguous | 0.437 | ambiguous | -0.963 | Destabilizing | 0.123 | N | 0.273 | neutral | None | None | None | None | I |
A/L | 0.1911 | likely_benign | 0.2205 | benign | -0.55 | Destabilizing | 0.839 | D | 0.441 | neutral | None | None | None | None | I |
A/M | 0.1907 | likely_benign | 0.2022 | benign | -0.435 | Destabilizing | 0.987 | D | 0.508 | neutral | None | None | None | None | I |
A/N | 0.1978 | likely_benign | 0.2221 | benign | -0.553 | Destabilizing | 0.247 | N | 0.535 | neutral | None | None | None | None | I |
A/P | 0.5533 | ambiguous | 0.7115 | pathogenic | -0.518 | Destabilizing | 0.937 | D | 0.483 | neutral | N | 0.493655794 | None | None | I |
A/Q | 0.2718 | likely_benign | 0.2944 | benign | -0.896 | Destabilizing | 0.973 | D | 0.505 | neutral | None | None | None | None | I |
A/R | 0.3453 | ambiguous | 0.3852 | ambiguous | -0.383 | Destabilizing | 0.948 | D | 0.456 | neutral | None | None | None | None | I |
A/S | 0.0815 | likely_benign | 0.0832 | benign | -0.702 | Destabilizing | 0.001 | N | 0.088 | neutral | N | 0.391739361 | None | None | I |
A/T | 0.0798 | likely_benign | 0.0829 | benign | -0.793 | Destabilizing | 0.004 | N | 0.247 | neutral | N | 0.403284506 | None | None | I |
A/V | 0.1173 | likely_benign | 0.1294 | benign | -0.518 | Destabilizing | 0.596 | D | 0.347 | neutral | N | 0.464218321 | None | None | I |
A/W | 0.6486 | likely_pathogenic | 0.703 | pathogenic | -1.272 | Destabilizing | 0.999 | D | 0.618 | neutral | None | None | None | None | I |
A/Y | 0.3765 | ambiguous | 0.4075 | ambiguous | -0.952 | Destabilizing | 0.948 | D | 0.606 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.