Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8345 | 25258;25259;25260 | chr2:178717973;178717972;178717971 | chr2:179582700;179582699;179582698 |
N2AB | 8028 | 24307;24308;24309 | chr2:178717973;178717972;178717971 | chr2:179582700;179582699;179582698 |
N2A | 7101 | 21526;21527;21528 | chr2:178717973;178717972;178717971 | chr2:179582700;179582699;179582698 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | None | None | None | N | 0.084 | 0.139 | 0.319114376414 | gnomAD-4.0.0 | 6.37397E-06 | None | None | None | None | I | None | 0 | 2.28728E-05 | None | 0 | 0 | None | 0 | 0 | 8.59303E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1059 | likely_benign | 0.1261 | benign | -1.099 | Destabilizing | None | N | 0.084 | neutral | N | 0.405188661 | None | None | I |
V/C | 0.8231 | likely_pathogenic | 0.8641 | pathogenic | -0.792 | Destabilizing | 0.002 | N | 0.355 | neutral | None | None | None | None | I |
V/D | 0.4097 | ambiguous | 0.5082 | ambiguous | -0.763 | Destabilizing | 0.001 | N | 0.365 | neutral | N | 0.430279106 | None | None | I |
V/E | 0.3535 | ambiguous | 0.4347 | ambiguous | -0.774 | Destabilizing | 0.001 | N | 0.281 | neutral | None | None | None | None | I |
V/F | 0.2296 | likely_benign | 0.2677 | benign | -0.811 | Destabilizing | 0.729 | D | 0.59 | neutral | N | 0.502915346 | None | None | I |
V/G | 0.2792 | likely_benign | 0.3791 | ambiguous | -1.382 | Destabilizing | 0.222 | N | 0.539 | neutral | N | 0.513993781 | None | None | I |
V/H | 0.6741 | likely_pathogenic | 0.7595 | pathogenic | -0.815 | Destabilizing | 0.94 | D | 0.595 | neutral | None | None | None | None | I |
V/I | 0.0947 | likely_benign | 0.1038 | benign | -0.442 | Destabilizing | None | N | 0.147 | neutral | N | 0.47897713 | None | None | I |
V/K | 0.4194 | ambiguous | 0.4943 | ambiguous | -0.945 | Destabilizing | 0.164 | N | 0.471 | neutral | None | None | None | None | I |
V/L | 0.2932 | likely_benign | 0.3686 | ambiguous | -0.442 | Destabilizing | 0.006 | N | 0.349 | neutral | N | 0.513473706 | None | None | I |
V/M | 0.178 | likely_benign | 0.2101 | benign | -0.462 | Destabilizing | 0.718 | D | 0.481 | neutral | None | None | None | None | I |
V/N | 0.3621 | ambiguous | 0.4659 | ambiguous | -0.773 | Destabilizing | 0.066 | N | 0.536 | neutral | None | None | None | None | I |
V/P | 0.9106 | likely_pathogenic | 0.9574 | pathogenic | -0.625 | Destabilizing | 0.126 | N | 0.581 | neutral | None | None | None | None | I |
V/Q | 0.3898 | ambiguous | 0.4787 | ambiguous | -0.921 | Destabilizing | 0.253 | N | 0.577 | neutral | None | None | None | None | I |
V/R | 0.3801 | ambiguous | 0.4627 | ambiguous | -0.442 | Destabilizing | 0.504 | D | 0.612 | neutral | None | None | None | None | I |
V/S | 0.2074 | likely_benign | 0.2718 | benign | -1.261 | Destabilizing | 0.009 | N | 0.302 | neutral | None | None | None | None | I |
V/T | 0.1458 | likely_benign | 0.1703 | benign | -1.16 | Destabilizing | 0.001 | N | 0.15 | neutral | None | None | None | None | I |
V/W | 0.9021 | likely_pathogenic | 0.94 | pathogenic | -0.978 | Destabilizing | 0.996 | D | 0.588 | neutral | None | None | None | None | I |
V/Y | 0.6745 | likely_pathogenic | 0.7479 | pathogenic | -0.673 | Destabilizing | 0.879 | D | 0.572 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.