Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8347 | 25264;25265;25266 | chr2:178717967;178717966;178717965 | chr2:179582694;179582693;179582692 |
N2AB | 8030 | 24313;24314;24315 | chr2:178717967;178717966;178717965 | chr2:179582694;179582693;179582692 |
N2A | 7103 | 21532;21533;21534 | chr2:178717967;178717966;178717965 | chr2:179582694;179582693;179582692 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | rs1345180729 | -0.261 | 0.917 | D | 0.801 | 0.427 | 0.404034981753 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.56E-05 | None | 0 | None | 0 | 0 | 0 |
S/P | rs1345180729 | -0.261 | 0.917 | D | 0.801 | 0.427 | 0.404034981753 | gnomAD-4.0.0 | 1.59401E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.77485E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1568 | likely_benign | 0.1758 | benign | -0.913 | Destabilizing | 0.023 | N | 0.563 | neutral | N | 0.49124742 | None | None | N |
S/C | 0.2058 | likely_benign | 0.2321 | benign | -0.481 | Destabilizing | 0.005 | N | 0.55 | neutral | N | 0.466719909 | None | None | N |
S/D | 0.9124 | likely_pathogenic | 0.9199 | pathogenic | -0.07 | Destabilizing | 0.672 | D | 0.725 | prob.delet. | None | None | None | None | N |
S/E | 0.9426 | likely_pathogenic | 0.9485 | pathogenic | -0.049 | Destabilizing | 0.741 | D | 0.727 | prob.delet. | None | None | None | None | N |
S/F | 0.7516 | likely_pathogenic | 0.8178 | pathogenic | -1.043 | Destabilizing | 0.976 | D | 0.804 | deleterious | N | 0.504610413 | None | None | N |
S/G | 0.2567 | likely_benign | 0.3163 | benign | -1.188 | Destabilizing | 0.792 | D | 0.682 | prob.neutral | None | None | None | None | N |
S/H | 0.8517 | likely_pathogenic | 0.882 | pathogenic | -1.561 | Destabilizing | 0.998 | D | 0.765 | deleterious | None | None | None | None | N |
S/I | 0.645 | likely_pathogenic | 0.7449 | pathogenic | -0.279 | Destabilizing | 0.931 | D | 0.804 | deleterious | None | None | None | None | N |
S/K | 0.9794 | likely_pathogenic | 0.9837 | pathogenic | -0.592 | Destabilizing | 0.885 | D | 0.725 | prob.delet. | None | None | None | None | N |
S/L | 0.3978 | ambiguous | 0.5135 | ambiguous | -0.279 | Destabilizing | 0.793 | D | 0.737 | prob.delet. | None | None | None | None | N |
S/M | 0.5763 | likely_pathogenic | 0.631 | pathogenic | 0.013 | Stabilizing | 0.995 | D | 0.773 | deleterious | None | None | None | None | N |
S/N | 0.6066 | likely_pathogenic | 0.657 | pathogenic | -0.586 | Destabilizing | 0.194 | N | 0.729 | prob.delet. | None | None | None | None | N |
S/P | 0.9683 | likely_pathogenic | 0.9824 | pathogenic | -0.456 | Destabilizing | 0.917 | D | 0.801 | deleterious | D | 0.534324463 | None | None | N |
S/Q | 0.9079 | likely_pathogenic | 0.9182 | pathogenic | -0.683 | Destabilizing | 0.982 | D | 0.774 | deleterious | None | None | None | None | N |
S/R | 0.9621 | likely_pathogenic | 0.9731 | pathogenic | -0.539 | Destabilizing | 0.964 | D | 0.817 | deleterious | None | None | None | None | N |
S/T | 0.11 | likely_benign | 0.104 | benign | -0.641 | Destabilizing | None | N | 0.305 | neutral | N | 0.459388505 | None | None | N |
S/V | 0.5028 | ambiguous | 0.5862 | pathogenic | -0.456 | Destabilizing | 0.589 | D | 0.761 | deleterious | None | None | None | None | N |
S/W | 0.8831 | likely_pathogenic | 0.9235 | pathogenic | -0.99 | Destabilizing | 0.998 | D | 0.835 | deleterious | None | None | None | None | N |
S/Y | 0.6943 | likely_pathogenic | 0.777 | pathogenic | -0.73 | Destabilizing | 0.976 | D | 0.809 | deleterious | D | 0.522968158 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.