Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8352 | 25279;25280;25281 | chr2:178717952;178717951;178717950 | chr2:179582679;179582678;179582677 |
N2AB | 8035 | 24328;24329;24330 | chr2:178717952;178717951;178717950 | chr2:179582679;179582678;179582677 |
N2A | 7108 | 21547;21548;21549 | chr2:178717952;178717951;178717950 | chr2:179582679;179582678;179582677 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | rs750897859 | -0.232 | 0.001 | N | 0.257 | 0.194 | 0.358340041657 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.92E-06 | 0 |
V/L | rs750897859 | -0.232 | 0.001 | N | 0.257 | 0.194 | 0.358340041657 | gnomAD-4.0.0 | 9.58653E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.72491E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1433 | likely_benign | 0.1609 | benign | -1.097 | Destabilizing | None | N | 0.083 | neutral | N | 0.4858416 | None | None | I |
V/C | 0.6581 | likely_pathogenic | 0.7059 | pathogenic | -0.794 | Destabilizing | 0.893 | D | 0.428 | neutral | None | None | None | None | I |
V/D | 0.1936 | likely_benign | 0.2207 | benign | -0.716 | Destabilizing | 0.086 | N | 0.543 | neutral | N | 0.48688175 | None | None | I |
V/E | 0.1649 | likely_benign | 0.1786 | benign | -0.731 | Destabilizing | 0.008 | N | 0.428 | neutral | None | None | None | None | I |
V/F | 0.1075 | likely_benign | 0.1187 | benign | -0.777 | Destabilizing | 0.333 | N | 0.467 | neutral | N | 0.500600409 | None | None | I |
V/G | 0.1772 | likely_benign | 0.2047 | benign | -1.388 | Destabilizing | 0.05 | N | 0.459 | neutral | D | 0.535443701 | None | None | I |
V/H | 0.3107 | likely_benign | 0.3403 | ambiguous | -0.884 | Destabilizing | 0.489 | N | 0.505 | neutral | None | None | None | None | I |
V/I | 0.0748 | likely_benign | 0.0767 | benign | -0.419 | Destabilizing | None | N | 0.145 | neutral | N | 0.463986248 | None | None | I |
V/K | 0.2117 | likely_benign | 0.242 | benign | -0.96 | Destabilizing | 0.001 | N | 0.304 | neutral | None | None | None | None | I |
V/L | 0.125 | likely_benign | 0.1343 | benign | -0.419 | Destabilizing | 0.001 | N | 0.257 | neutral | N | 0.455366765 | None | None | I |
V/M | 0.1274 | likely_benign | 0.1317 | benign | -0.392 | Destabilizing | 0.321 | N | 0.382 | neutral | None | None | None | None | I |
V/N | 0.1414 | likely_benign | 0.1604 | benign | -0.754 | Destabilizing | None | N | 0.371 | neutral | None | None | None | None | I |
V/P | 0.7088 | likely_pathogenic | 0.7893 | pathogenic | -0.609 | Destabilizing | 0.026 | N | 0.504 | neutral | None | None | None | None | I |
V/Q | 0.1922 | likely_benign | 0.212 | benign | -0.908 | Destabilizing | 0.002 | N | 0.345 | neutral | None | None | None | None | I |
V/R | 0.1814 | likely_benign | 0.2091 | benign | -0.471 | Destabilizing | 0.001 | N | 0.374 | neutral | None | None | None | None | I |
V/S | 0.1361 | likely_benign | 0.1535 | benign | -1.27 | Destabilizing | 0.021 | N | 0.436 | neutral | None | None | None | None | I |
V/T | 0.1258 | likely_benign | 0.1343 | benign | -1.175 | Destabilizing | None | N | 0.095 | neutral | None | None | None | None | I |
V/W | 0.6582 | likely_pathogenic | 0.6976 | pathogenic | -0.949 | Destabilizing | 0.976 | D | 0.525 | neutral | None | None | None | None | I |
V/Y | 0.3449 | ambiguous | 0.3716 | ambiguous | -0.651 | Destabilizing | 0.573 | D | 0.463 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.