Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8353 | 25282;25283;25284 | chr2:178717949;178717948;178717947 | chr2:179582676;179582675;179582674 |
N2AB | 8036 | 24331;24332;24333 | chr2:178717949;178717948;178717947 | chr2:179582676;179582675;179582674 |
N2A | 7109 | 21550;21551;21552 | chr2:178717949;178717948;178717947 | chr2:179582676;179582675;179582674 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.994 | N | 0.589 | 0.638 | 0.888503533679 | gnomAD-4.0.0 | 1.59872E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43612E-05 | 0 |
I/V | None | None | None | N | 0.315 | 0.135 | 0.447803500395 | gnomAD-4.0.0 | 1.37112E-06 | None | None | None | None | I | None | 0 | 4.48149E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.5897 | likely_pathogenic | 0.6685 | pathogenic | -1.712 | Destabilizing | 0.747 | D | 0.459 | neutral | None | None | None | None | I |
I/C | 0.8194 | likely_pathogenic | 0.868 | pathogenic | -0.902 | Destabilizing | 0.999 | D | 0.575 | neutral | None | None | None | None | I |
I/D | 0.9235 | likely_pathogenic | 0.9512 | pathogenic | -1.422 | Destabilizing | 0.985 | D | 0.584 | neutral | None | None | None | None | I |
I/E | 0.837 | likely_pathogenic | 0.881 | pathogenic | -1.361 | Destabilizing | 0.98 | D | 0.59 | neutral | None | None | None | None | I |
I/F | 0.3151 | likely_benign | 0.3841 | ambiguous | -1.048 | Destabilizing | 0.908 | D | 0.485 | neutral | N | 0.504390739 | None | None | I |
I/G | 0.8415 | likely_pathogenic | 0.8924 | pathogenic | -2.069 | Highly Destabilizing | 0.014 | N | 0.368 | neutral | None | None | None | None | I |
I/H | 0.8476 | likely_pathogenic | 0.8985 | pathogenic | -1.201 | Destabilizing | 0.999 | D | 0.58 | neutral | None | None | None | None | I |
I/K | 0.7074 | likely_pathogenic | 0.7725 | pathogenic | -1.298 | Destabilizing | 0.662 | D | 0.587 | neutral | None | None | None | None | I |
I/L | 0.1466 | likely_benign | 0.184 | benign | -0.77 | Destabilizing | 0.001 | N | 0.296 | neutral | N | 0.511457695 | None | None | I |
I/M | 0.1371 | likely_benign | 0.1672 | benign | -0.615 | Destabilizing | 0.912 | D | 0.497 | neutral | N | 0.504390739 | None | None | I |
I/N | 0.5926 | likely_pathogenic | 0.683 | pathogenic | -1.214 | Destabilizing | 0.994 | D | 0.589 | neutral | N | 0.516254024 | None | None | I |
I/P | 0.8366 | likely_pathogenic | 0.8764 | pathogenic | -1.056 | Destabilizing | 0.999 | D | 0.587 | neutral | None | None | None | None | I |
I/Q | 0.7438 | likely_pathogenic | 0.8094 | pathogenic | -1.316 | Destabilizing | 0.997 | D | 0.583 | neutral | None | None | None | None | I |
I/R | 0.6521 | likely_pathogenic | 0.7219 | pathogenic | -0.733 | Destabilizing | 0.989 | D | 0.582 | neutral | None | None | None | None | I |
I/S | 0.5923 | likely_pathogenic | 0.6724 | pathogenic | -1.782 | Destabilizing | 0.961 | D | 0.535 | neutral | N | 0.516000534 | None | None | I |
I/T | 0.4759 | ambiguous | 0.5632 | ambiguous | -1.604 | Destabilizing | 0.754 | D | 0.509 | neutral | N | 0.50388376 | None | None | I |
I/V | 0.0907 | likely_benign | 0.1008 | benign | -1.056 | Destabilizing | None | N | 0.315 | neutral | N | 0.356052627 | None | None | I |
I/W | 0.9013 | likely_pathogenic | 0.9299 | pathogenic | -1.196 | Destabilizing | 1.0 | D | 0.576 | neutral | None | None | None | None | I |
I/Y | 0.7572 | likely_pathogenic | 0.8098 | pathogenic | -0.962 | Destabilizing | 0.916 | D | 0.567 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.