Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8361 | 25306;25307;25308 | chr2:178717793;178717792;178717791 | chr2:179582520;179582519;179582518 |
N2AB | 8044 | 24355;24356;24357 | chr2:178717793;178717792;178717791 | chr2:179582520;179582519;179582518 |
N2A | 7117 | 21574;21575;21576 | chr2:178717793;178717792;178717791 | chr2:179582520;179582519;179582518 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs1553901979 | None | None | N | 0.134 | 0.073 | 0.186928172975 | gnomAD-4.0.0 | 6.87138E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.01988E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.0845 | likely_benign | 0.0967 | benign | -1.453 | Destabilizing | None | N | 0.177 | neutral | None | None | None | None | N |
F/C | 0.1428 | likely_benign | 0.1719 | benign | -0.629 | Destabilizing | 0.003 | N | 0.316 | neutral | N | 0.475472678 | None | None | N |
F/D | 0.4663 | ambiguous | 0.5504 | ambiguous | 0.264 | Stabilizing | None | N | 0.235 | neutral | None | None | None | None | N |
F/E | 0.6034 | likely_pathogenic | 0.6508 | pathogenic | 0.289 | Stabilizing | None | N | 0.23 | neutral | None | None | None | None | N |
F/G | 0.2594 | likely_benign | 0.3412 | ambiguous | -1.704 | Destabilizing | None | N | 0.242 | neutral | None | None | None | None | N |
F/H | 0.2852 | likely_benign | 0.3269 | benign | 0.002 | Stabilizing | 0.008 | N | 0.269 | neutral | None | None | None | None | N |
F/I | 0.098 | likely_benign | 0.1098 | benign | -0.754 | Destabilizing | None | N | 0.155 | neutral | N | 0.424121138 | None | None | N |
F/K | 0.6242 | likely_pathogenic | 0.683 | pathogenic | -0.533 | Destabilizing | None | N | 0.23 | neutral | None | None | None | None | N |
F/L | 0.3226 | likely_benign | 0.3913 | ambiguous | -0.754 | Destabilizing | None | N | 0.134 | neutral | N | 0.448728794 | None | None | N |
F/M | 0.2206 | likely_benign | 0.2315 | benign | -0.618 | Destabilizing | 0.001 | N | 0.269 | neutral | None | None | None | None | N |
F/N | 0.1618 | likely_benign | 0.1951 | benign | -0.566 | Destabilizing | None | N | 0.237 | neutral | None | None | None | None | N |
F/P | 0.9142 | likely_pathogenic | 0.9559 | pathogenic | -0.972 | Destabilizing | None | N | 0.267 | neutral | None | None | None | None | N |
F/Q | 0.4544 | ambiguous | 0.5135 | ambiguous | -0.614 | Destabilizing | None | N | 0.274 | neutral | None | None | None | None | N |
F/R | 0.461 | ambiguous | 0.5258 | ambiguous | 0.033 | Stabilizing | None | N | 0.269 | neutral | None | None | None | None | N |
F/S | 0.051 | likely_benign | 0.0536 | benign | -1.307 | Destabilizing | None | N | 0.168 | neutral | N | 0.335558004 | None | None | N |
F/T | 0.0666 | likely_benign | 0.0685 | benign | -1.188 | Destabilizing | None | N | 0.168 | neutral | None | None | None | None | N |
F/V | 0.0846 | likely_benign | 0.0914 | benign | -0.972 | Destabilizing | None | N | 0.161 | neutral | N | 0.406244666 | None | None | N |
F/W | 0.3569 | ambiguous | 0.4033 | ambiguous | -0.233 | Destabilizing | 0.051 | N | 0.271 | neutral | None | None | None | None | N |
F/Y | 0.1028 | likely_benign | 0.1067 | benign | -0.356 | Destabilizing | 0.001 | N | 0.265 | neutral | N | 0.439935952 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.