Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8365 | 25318;25319;25320 | chr2:178717781;178717780;178717779 | chr2:179582508;179582507;179582506 |
N2AB | 8048 | 24367;24368;24369 | chr2:178717781;178717780;178717779 | chr2:179582508;179582507;179582506 |
N2A | 7121 | 21586;21587;21588 | chr2:178717781;178717780;178717779 | chr2:179582508;179582507;179582506 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs2077715561 | None | 0.999 | N | 0.622 | 0.367 | 0.268660756437 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/N | rs2077715561 | None | 0.999 | N | 0.622 | 0.367 | 0.268660756437 | gnomAD-4.0.0 | 6.84128E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.34602E-06 | 0 | 0 |
K/T | rs2077715930 | None | 0.998 | D | 0.659 | 0.405 | 0.53787198782 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 1.92827E-04 | None | 0 | 0 | 0 | 0 | 0 |
K/T | rs2077715930 | None | 0.998 | D | 0.659 | 0.405 | 0.53787198782 | gnomAD-4.0.0 | 5.16261E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.42966E-05 | None | 0 | 0 | 0 | 0 | 8.60486E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3777 | ambiguous | 0.4292 | ambiguous | -0.398 | Destabilizing | 0.996 | D | 0.621 | neutral | None | None | None | None | N |
K/C | 0.8204 | likely_pathogenic | 0.8457 | pathogenic | -0.473 | Destabilizing | 1.0 | D | 0.738 | prob.delet. | None | None | None | None | N |
K/D | 0.5658 | likely_pathogenic | 0.6363 | pathogenic | 0.414 | Stabilizing | 0.999 | D | 0.663 | neutral | None | None | None | None | N |
K/E | 0.2046 | likely_benign | 0.2364 | benign | 0.501 | Stabilizing | 0.983 | D | 0.579 | neutral | N | 0.508566531 | None | None | N |
K/F | 0.8097 | likely_pathogenic | 0.8447 | pathogenic | -0.217 | Destabilizing | 1.0 | D | 0.726 | prob.delet. | None | None | None | None | N |
K/G | 0.5106 | ambiguous | 0.5693 | pathogenic | -0.703 | Destabilizing | 0.998 | D | 0.632 | neutral | None | None | None | None | N |
K/H | 0.335 | likely_benign | 0.3665 | ambiguous | -0.839 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | N |
K/I | 0.4318 | ambiguous | 0.4797 | ambiguous | 0.363 | Stabilizing | 0.992 | D | 0.751 | deleterious | N | 0.506710327 | None | None | N |
K/L | 0.4141 | ambiguous | 0.4678 | ambiguous | 0.363 | Stabilizing | 0.981 | D | 0.641 | neutral | None | None | None | None | N |
K/M | 0.2806 | likely_benign | 0.3193 | benign | 0.06 | Stabilizing | 1.0 | D | 0.68 | prob.neutral | None | None | None | None | N |
K/N | 0.4041 | ambiguous | 0.4455 | ambiguous | -0.081 | Destabilizing | 0.999 | D | 0.622 | neutral | N | 0.485607559 | None | None | N |
K/P | 0.3774 | ambiguous | 0.4211 | ambiguous | 0.139 | Stabilizing | 0.441 | N | 0.369 | neutral | None | None | None | None | N |
K/Q | 0.1389 | likely_benign | 0.1527 | benign | -0.138 | Destabilizing | 0.988 | D | 0.625 | neutral | N | 0.490962205 | None | None | N |
K/R | 0.0973 | likely_benign | 0.1056 | benign | -0.201 | Destabilizing | 0.203 | N | 0.333 | neutral | D | 0.522823908 | None | None | N |
K/S | 0.431 | ambiguous | 0.48 | ambiguous | -0.76 | Destabilizing | 0.998 | D | 0.613 | neutral | None | None | None | None | N |
K/T | 0.1865 | likely_benign | 0.2098 | benign | -0.477 | Destabilizing | 0.998 | D | 0.659 | neutral | D | 0.525517496 | None | None | N |
K/V | 0.3926 | ambiguous | 0.44 | ambiguous | 0.139 | Stabilizing | 0.986 | D | 0.655 | neutral | None | None | None | None | N |
K/W | 0.8257 | likely_pathogenic | 0.863 | pathogenic | -0.113 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
K/Y | 0.6705 | likely_pathogenic | 0.7202 | pathogenic | 0.178 | Stabilizing | 0.996 | D | 0.73 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.