Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8366 | 25321;25322;25323 | chr2:178717778;178717777;178717776 | chr2:179582505;179582504;179582503 |
N2AB | 8049 | 24370;24371;24372 | chr2:178717778;178717777;178717776 | chr2:179582505;179582504;179582503 |
N2A | 7122 | 21589;21590;21591 | chr2:178717778;178717777;178717776 | chr2:179582505;179582504;179582503 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | None | None | 1.0 | N | 0.874 | 0.441 | 0.663968203398 | gnomAD-4.0.0 | 1.60519E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.45151E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.8703 | likely_pathogenic | 0.8795 | pathogenic | -2.119 | Highly Destabilizing | 0.997 | D | 0.533 | neutral | None | None | None | None | N |
L/C | 0.9492 | likely_pathogenic | 0.9487 | pathogenic | -1.473 | Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
L/D | 0.9977 | likely_pathogenic | 0.9982 | pathogenic | -1.691 | Destabilizing | 1.0 | D | 0.875 | deleterious | None | None | None | None | N |
L/E | 0.9816 | likely_pathogenic | 0.9858 | pathogenic | -1.51 | Destabilizing | 1.0 | D | 0.851 | deleterious | None | None | None | None | N |
L/F | 0.8148 | likely_pathogenic | 0.8278 | pathogenic | -1.234 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
L/G | 0.9724 | likely_pathogenic | 0.9779 | pathogenic | -2.628 | Highly Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | N |
L/H | 0.9856 | likely_pathogenic | 0.9898 | pathogenic | -1.979 | Destabilizing | 1.0 | D | 0.877 | deleterious | None | None | None | None | N |
L/I | 0.241 | likely_benign | 0.2066 | benign | -0.686 | Destabilizing | 0.924 | D | 0.507 | neutral | None | None | None | None | N |
L/K | 0.9836 | likely_pathogenic | 0.9868 | pathogenic | -1.292 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
L/M | 0.3341 | likely_benign | 0.3185 | benign | -0.716 | Destabilizing | 0.998 | D | 0.739 | prob.delet. | N | 0.452238031 | None | None | N |
L/N | 0.983 | likely_pathogenic | 0.987 | pathogenic | -1.449 | Destabilizing | 1.0 | D | 0.884 | deleterious | None | None | None | None | N |
L/P | 0.7654 | likely_pathogenic | 0.7432 | pathogenic | -1.14 | Destabilizing | 1.0 | D | 0.874 | deleterious | N | 0.474551013 | None | None | N |
L/Q | 0.9371 | likely_pathogenic | 0.9537 | pathogenic | -1.369 | Destabilizing | 1.0 | D | 0.861 | deleterious | N | 0.478824982 | None | None | N |
L/R | 0.9692 | likely_pathogenic | 0.9775 | pathogenic | -1.058 | Destabilizing | 1.0 | D | 0.849 | deleterious | N | 0.501448687 | None | None | N |
L/S | 0.9792 | likely_pathogenic | 0.9838 | pathogenic | -2.257 | Highly Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
L/T | 0.9174 | likely_pathogenic | 0.9239 | pathogenic | -1.928 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
L/V | 0.279 | likely_benign | 0.2321 | benign | -1.14 | Destabilizing | 0.154 | N | 0.267 | neutral | N | 0.441513609 | None | None | N |
L/W | 0.9644 | likely_pathogenic | 0.9737 | pathogenic | -1.486 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
L/Y | 0.9832 | likely_pathogenic | 0.9869 | pathogenic | -1.187 | Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.