Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8368 | 25327;25328;25329 | chr2:178717772;178717771;178717770 | chr2:179582499;179582498;179582497 |
N2AB | 8051 | 24376;24377;24378 | chr2:178717772;178717771;178717770 | chr2:179582499;179582498;179582497 |
N2A | 7124 | 21595;21596;21597 | chr2:178717772;178717771;178717770 | chr2:179582499;179582498;179582497 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | rs369089044 | -0.066 | 0.992 | N | 0.365 | 0.241 | 0.0806252709748 | gnomAD-2.1.1 | 3.29E-05 | None | None | None | None | N | None | 6.57E-05 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.38E-05 | 0 |
D/E | rs369089044 | -0.066 | 0.992 | N | 0.365 | 0.241 | 0.0806252709748 | gnomAD-3.1.2 | 3.29E-05 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 7.35E-05 | 0 | 0 |
D/E | rs369089044 | -0.066 | 0.992 | N | 0.365 | 0.241 | 0.0806252709748 | gnomAD-4.0.0 | 3.79157E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.92553E-05 | 0 | 4.82129E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.4152 | ambiguous | 0.5519 | ambiguous | -0.459 | Destabilizing | 0.999 | D | 0.546 | neutral | N | 0.458047701 | None | None | N |
D/C | 0.9403 | likely_pathogenic | 0.9667 | pathogenic | -0.329 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
D/E | 0.3264 | likely_benign | 0.3977 | ambiguous | -0.515 | Destabilizing | 0.992 | D | 0.365 | neutral | N | 0.453893418 | None | None | N |
D/F | 0.9324 | likely_pathogenic | 0.9674 | pathogenic | -0.025 | Destabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | N |
D/G | 0.4152 | ambiguous | 0.5733 | pathogenic | -0.766 | Destabilizing | 0.997 | D | 0.438 | neutral | N | 0.464377577 | None | None | N |
D/H | 0.6972 | likely_pathogenic | 0.8075 | pathogenic | -0.137 | Destabilizing | 1.0 | D | 0.647 | neutral | N | 0.467695713 | None | None | N |
D/I | 0.8209 | likely_pathogenic | 0.8942 | pathogenic | 0.34 | Stabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
D/K | 0.8575 | likely_pathogenic | 0.9294 | pathogenic | -0.456 | Destabilizing | 1.0 | D | 0.619 | neutral | None | None | None | None | N |
D/L | 0.8364 | likely_pathogenic | 0.9117 | pathogenic | 0.34 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
D/M | 0.9205 | likely_pathogenic | 0.9529 | pathogenic | 0.535 | Stabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
D/N | 0.2073 | likely_benign | 0.2632 | benign | -0.777 | Destabilizing | 0.725 | D | 0.263 | neutral | N | 0.470185344 | None | None | N |
D/P | 0.7235 | likely_pathogenic | 0.8325 | pathogenic | 0.098 | Stabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
D/Q | 0.7832 | likely_pathogenic | 0.8758 | pathogenic | -0.65 | Destabilizing | 1.0 | D | 0.583 | neutral | None | None | None | None | N |
D/R | 0.8742 | likely_pathogenic | 0.9426 | pathogenic | -0.141 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
D/S | 0.3343 | likely_benign | 0.4319 | ambiguous | -0.99 | Destabilizing | 0.998 | D | 0.373 | neutral | None | None | None | None | N |
D/T | 0.5934 | likely_pathogenic | 0.7031 | pathogenic | -0.749 | Destabilizing | 0.996 | D | 0.59 | neutral | None | None | None | None | N |
D/V | 0.6009 | likely_pathogenic | 0.729 | pathogenic | 0.098 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | N | 0.467442223 | None | None | N |
D/W | 0.9823 | likely_pathogenic | 0.9921 | pathogenic | 0.146 | Stabilizing | 1.0 | D | 0.686 | prob.neutral | None | None | None | None | N |
D/Y | 0.6176 | likely_pathogenic | 0.767 | pathogenic | 0.186 | Stabilizing | 1.0 | D | 0.691 | prob.neutral | N | 0.499878525 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.