Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 8376 | 25351;25352;25353 | chr2:178717748;178717747;178717746 | chr2:179582475;179582474;179582473 |
N2AB | 8059 | 24400;24401;24402 | chr2:178717748;178717747;178717746 | chr2:179582475;179582474;179582473 |
N2A | 7132 | 21619;21620;21621 | chr2:178717748;178717747;178717746 | chr2:179582475;179582474;179582473 |
N2B | None | None | chr2:None | chr2:None |
Novex-1 | None | None | chr2:None | chr2:None |
Novex-2 | None | None | chr2:None | chr2:None |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs375209098 | -1.367 | 0.633 | N | 0.226 | 0.225 | None | gnomAD-2.1.1 | 1.11539E-04 | None | None | None | None | N | None | 0 | 5.68E-05 | None | 0 | 0 | None | 0 | None | 4.01E-05 | 2.13398E-04 | 1.41884E-04 |
P/S | rs375209098 | -1.367 | 0.633 | N | 0.226 | 0.225 | None | gnomAD-3.1.2 | 1.11758E-04 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 9.43E-05 | 0 | 2.20556E-04 | 0 | 0 |
P/S | rs375209098 | -1.367 | 0.633 | N | 0.226 | 0.225 | None | gnomAD-4.0.0 | 1.22752E-04 | None | None | None | None | N | None | 1.33586E-05 | 3.33567E-05 | None | 0 | 0 | None | 3.13234E-05 | 0 | 1.61081E-04 | 0 | 4.80631E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1359 | likely_benign | 0.1246 | benign | -1.069 | Destabilizing | 0.728 | D | 0.464 | neutral | N | 0.514950999 | None | None | N |
P/C | 0.8067 | likely_pathogenic | 0.7971 | pathogenic | -0.7 | Destabilizing | 0.999 | D | 0.718 | prob.delet. | None | None | None | None | N |
P/D | 0.72 | likely_pathogenic | 0.7298 | pathogenic | -0.514 | Destabilizing | 0.936 | D | 0.509 | neutral | None | None | None | None | N |
P/E | 0.5617 | ambiguous | 0.5618 | ambiguous | -0.531 | Destabilizing | 0.959 | D | 0.497 | neutral | None | None | None | None | N |
P/F | 0.7965 | likely_pathogenic | 0.7912 | pathogenic | -0.79 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | None | None | None | None | N |
P/G | 0.5316 | ambiguous | 0.5026 | ambiguous | -1.35 | Destabilizing | 0.977 | D | 0.535 | neutral | None | None | None | None | N |
P/H | 0.3719 | ambiguous | 0.3633 | ambiguous | -0.76 | Destabilizing | 1.0 | D | 0.665 | neutral | None | None | None | None | N |
P/I | 0.681 | likely_pathogenic | 0.6953 | pathogenic | -0.421 | Destabilizing | 0.997 | D | 0.707 | prob.neutral | None | None | None | None | N |
P/K | 0.5826 | likely_pathogenic | 0.5721 | pathogenic | -0.804 | Destabilizing | 0.995 | D | 0.479 | neutral | None | None | None | None | N |
P/L | 0.2794 | likely_benign | 0.2748 | benign | -0.421 | Destabilizing | 0.988 | D | 0.565 | neutral | D | 0.528728373 | None | None | N |
P/M | 0.6559 | likely_pathogenic | 0.6494 | pathogenic | -0.373 | Destabilizing | 0.942 | D | 0.425 | neutral | None | None | None | None | N |
P/N | 0.5999 | likely_pathogenic | 0.5881 | pathogenic | -0.595 | Destabilizing | 0.989 | D | 0.667 | neutral | None | None | None | None | N |
P/Q | 0.321 | likely_benign | 0.306 | benign | -0.747 | Destabilizing | 0.998 | D | 0.594 | neutral | N | 0.487463529 | None | None | N |
P/R | 0.3218 | likely_benign | 0.3197 | benign | -0.306 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | N | 0.515644432 | None | None | N |
P/S | 0.1976 | likely_benign | 0.1791 | benign | -1.135 | Destabilizing | 0.633 | D | 0.226 | neutral | N | 0.468541132 | None | None | N |
P/T | 0.2295 | likely_benign | 0.2177 | benign | -1.037 | Destabilizing | 0.908 | D | 0.481 | neutral | N | 0.494882371 | None | None | N |
P/V | 0.4858 | ambiguous | 0.4943 | ambiguous | -0.6 | Destabilizing | 0.949 | D | 0.531 | neutral | None | None | None | None | N |
P/W | 0.8578 | likely_pathogenic | 0.861 | pathogenic | -0.935 | Destabilizing | 1.0 | D | 0.711 | prob.delet. | None | None | None | None | N |
P/Y | 0.7571 | likely_pathogenic | 0.754 | pathogenic | -0.639 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.